Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.208379
Trip4
thyroid hormone receptor interactor 4
9
9 C
56404
Mm.208379
D030028M11Rik
RIKEN cDNA D030028M11 gene
9
319910
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 39 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CTGAAATTGT
(
2
)
3.3
0.0033
P8 Cb GC
GTAAACTAAA (
5
)
1.6
0.0016
Cb medulloblastoma
CTGAAATTGT
(
2
)
4.6
0.0046
Cb medulloblastoma
AAACAAAAAA (
12
)
2.3
0.0023
Cb medulloblastoma
TGTGTTTGTG (
12
)
2.3
0.0023
P8 GC+1d culture
TGTGTTTGTG (
12
)
5.7
0.0057
P8 GC+1d culture
CTGAAATTGT
(
2
)
3.4
0.0034
P8 GC+1d culture
GTAAACTAAA (
5
)
2.3
0.0023
P8 GC+SHH+1d culture
CTGAAATTGT
(
2
)
7
0.007
P8 GC+SHH+1d culture
AATTGTATTT (
4
)
2.3
0.0023
P8 GC+SHH+1d culture
TGTGTTTGTG (
12
)
2.3
0.0023
P8 GC+SHH+1d culture
GTAAACTAAA (
5
)
1.2
0.0012
E15 cortex
CTGAAATTGT
(
2
)
9.9
0.0099
P1 cortex
TGTGTTTGTG (
12
)
9.1
0.0091
Hypothalamus
CTGAAATTGT
(
2
)
3.6
0.0036
Hypothalamus
AAACAAAAAA (
12
)
1.8
0.0018
E12.5 retina
TGTGTTTGTG (
12
)
1.9
0.0019
E14.5 retina
AAACAAAAAA (
12
)
1.8
0.0018
E14.5 retina
CTGAAATTGT
(
2
)
1.8
0.0018
E16.5 retina
CTGAAATTGT
(
2
)
3.6
0.0036
E16.5 retina
TGTGTTTGTG (
12
)
3.6
0.0036
E18.5 retina
AAACAAAAAA (
12
)
3.6
0.0036
E18.5 retina
CTGAAATTGT
(
2
)
3.6
0.0036
P0.5 retina
TGTGTTTGTG (
12
)
7.9
0.0079
P2.5 retina
TGTGTTTGTG (
12
)
3.5
0.0035
P2.5 retina
AAACAAAAAA (
12
)
1.8
0.0018
P2.5 retina
CTGAAATTGT
(
2
)
1.8
0.0018
P4.5 retina
CTGAAATTGT
(
2
)
13.9
0.0139
P4.5 retina
AAACAAAAAA (
12
)
2
0.002
P6.5 retina
TGTGTTTGTG (
12
)
8.3
0.0083
P6.5 retina
CTGAAATTGT
(
2
)
5
0.005
P10.5 crx- retina
TGTGTTTGTG (
12
)
3.7
0.0037
P10.5 crx- retina
CTGAAATTGT
(
2
)
1.9
0.0019
P10.5 crx+ retina
CTGAAATTGT
(
2
)
7.7
0.0077
P10.5 crx+ retina
TGTGTTTGTG (
12
)
5.8
0.0058
Adult retinal
CTGAAATTGT
(
2
)
1.9
0.0019
Adult retinal
TGTGTTTGTG (
12
)
1.9
0.0019
ONL
CTGAAATTGT
(
2
)
1.9
0.0019
ONL
TGTGTTTGTG (
12
)
1.9
0.0019
