Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.209491	2610318I01Rik	RIKEN cDNA 2610318I01 gene	3		214459
Human Homolog	C1orf39[chromosome 1 open reading frame 39]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 84 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGGATGCTGG (15) 13.1 0.0131 P8 Cb GC GTCAAAAAAA (15) 4.9 0.0049 P8 Cb GC TGAGCTGTCT (4) 3.3 0.0033 P8 Cb GC GATCAAACTA (3) 1.6 0.0016 P8 Cb GC GTCAGTTAAA (2) 1.6 0.0016 P8 Cb GC TGCACATCTG (3) 1.6 0.0016 Cb medulloblastoma GTCAAAAAAA (15) 6.9 0.0069 Cb medulloblastoma TGGATGCTGG (15) 4.6 0.0046 Cb medulloblastoma GTCAGTTAAA (2) 2.3 0.0023 P8 GC+1d culture GTCAAAAAAA (15) 12.6 0.0126 P8 GC+1d culture GTCAGTTAAA (2) 9.1 0.0091 P8 GC+1d culture TGGATGCTGG (15) 8 0.008 P8 GC+1d culture TGAGCTGTCT (4) 4.6 0.0046 P8 GC+1d culture CAGATTTTTT (2) 1.1 0.0011 P8 GC+1d culture GATCAAACTA (3) 1.1 0.0011 P8 GC+1d culture TGCACATCTG (3) 1.1 0.0011 P8 GC+SHH+1d culture GTCAAAAAAA (15) 15.2 0.0152 P8 GC+SHH+1d culture GTCAGTTAAA (2) 4.7 0.0047 P8 GC+SHH+1d culture CAGATTTTTT (2) 2.3 0.0023 P8 GC+SHH+1d culture TGGATGCTGG (15) 2.3 0.0023 P8 GC+SHH+1d culture AAGGAACTTG 1.2 0.0012 P8 GC+SHH+1d culture GGTCAAAAAA (7) 1.2 0.0012 P8 GC+SHH+1d culture TGAGCTGTCT (4) 1.2 0.0012 3T3 fibroblasts TGAGCTGTCT (4) 3.5 0.0035 3T3 fibroblasts TGGATGCTGG (15) 3.5 0.0035 E15 cortex GTCAAAAAAA (15) 24.7 0.0247 E15 cortex TGGATGCTGG (15) 14.8 0.0148 E15 cortex GGTCAAAAAA (7) 4.9 0.0049 E15 cortex GTCAGTTAAA (2) 4.9 0.0049 P1 cortex GTCAAAAAAA (15) 22.7 0.0227 P1 cortex GTCAGTTAAA (2) 4.5 0.0045 P1 cortex TGAGCTGTCT (4) 4.5 0.0045 Hypothalamus GTCAAAAAAA (15) 5.4 0.0054 Hypothalamus TGGATGCTGG (15) 5.4 0.0054 Hypothalamus TGAGCTGTCT (4) 1.8 0.0018 E12.5 retina TGGATGCTGG (15) 5.6 0.0056 E12.5 retina GTCAAAAAAA (15) 1.9 0.0019 E12.5 retina GTCAGTTAAA (2) 1.9 0.0019 E12.5 retina TGAGCTGTCT (4) 1.9 0.0019 E14.5 retina TGGATGCTGG (15) 18.2 0.0182 E14.5 retina GTCAAAAAAA (15) 10.9 0.0109 E14.5 retina GGTCAAAAAA (7) 1.8 0.0018 E14.5 retina GTCAGTTAAA (2) 1.8 0.0018 E16.5 retina TGGATGCTGG (15) 30.8 0.0308 E16.5 retina GTCAAAAAAA (15) 10.9 0.0109 E16.5 retina TGCACATCTG (3) 3.6 0.0036 E16.5 retina AAGGAACTTG 1.8 0.0018 E16.5 retina CAGATTTTTT (2) 1.8 0.0018 E16.5 retina GTCAGTTAAA (2) 1.8 0.0018 E18.5 retina GTCAAAAAAA (15) 30.9 0.0309 E18.5 retina GTCAGTTAAA (2) 9.1 0.0091 E18.5 retina AAGGAACTTG 1.8 0.0018 E18.5 retina GGTCAAAAAA (7) 1.8 0.0018 E18.5 retina TGAGCTGTCT (4) 1.8 0.0018 E18.5 retina TGGATGCTGG (15) 1.8 0.0018 P0.5 retina GTCAAAAAAA (15) 7.9 0.0079 P0.5 retina TGGATGCTGG (15) 7.9 0.0079 P0.5 retina GTCAGTTAAA (2) 2 0.002 P2.5 retina TGGATGCTGG (15) 15.8 0.0158 P2.5 retina GTCAAAAAAA (15) 10.6 0.0106 P2.5 retina GTCAGTTAAA (2) 7 0.007 P2.5 retina AAGGAACTTG 1.8 0.0018 P2.5 retina GATCAAACTA (3) 1.8 0.0018 P4.5 retina GTCAGTTAAA (2) 9.9 0.0099 P4.5 retina TGGATGCTGG (15) 5.9 0.0059 P4.5 retina GGTCAAAAAA (7) 2 0.002 P4.5 retina GTCAAAAAAA (15) 2 0.002 P6.5 retina GTCAAAAAAA (15) 10 0.01 P6.5 retina TGGATGCTGG (15) 6.7 0.0067 P6.5 retina AAGGAACTTG 1.7 0.0017 P6.5 retina GATCAAACTA (3) 1.7 0.0017 P6.5 retina GTCAGTTAAA (2) 1.7 0.0017 P10.5 crx- retina TGGATGCTGG (15) 5.6 0.0056 P10.5 crx- retina GTCAAAAAAA (15) 3.7 0.0037 P10.5 crx+ retina GTCAAAAAAA (15) 5.8 0.0058 P10.5 crx+ retina TGGATGCTGG (15) 5.8 0.0058 P10.5 crx+ retina GTCAGTTAAA (2) 3.8 0.0038 P10.5 crx+ retina TGAGCTGTCT (4) 1.9 0.0019 Adult retinal GTCAAAAAAA (15) 7.4 0.0074 Adult retinal TGGATGCTGG (15) 5.6 0.0056 Adult retinal TGAGCTGTCT (4) 1.9 0.0019 ONL GATCAAACTA (3) 1.9 0.0019 ONL GTCAAAAAAA (15) 1.9 0.0019 ONL TGAGCTGTCT (4) 1.9 0.0019