Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.209568	Scp2	sterol carrier protein 2, liver	4	4 52.0 cM	20280
Gene Ontology	acyl-CoA metabolism | lipid binding | lipid transport | mitochondrion | peroxisome | peroxisome organization and biogenesis | sterol carrier activity | sterol carrier protein X-related thiolase activity | transport
Human Homolog	SCP2[sterol carrier protein 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 76 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCCAAACCAA (5) 19.6 0.0196 P8 Cb GC AGATAGATTT 1.6 0.0016 P8 Cb GC GGTACATTAT (2) 1.6 0.0016 Cb medulloblastoma GCCAAACCAA (5) 18.5 0.0185 Cb medulloblastoma GATACCATTA 2.3 0.0023 Cb medulloblastoma GGACCTCCTG (4) 2.3 0.0023 P8 GC+1d culture GCCAAACCAA (5) 12.6 0.0126 P8 GC+1d culture AGATAGATTT 2.3 0.0023 P8 GC+1d culture GATACCATTA 1.1 0.0011 P8 GC+SHH+1d culture GCCAAACCAA (5) 8.2 0.0082 P8 GC+SHH+1d culture GATACCATTA 5.9 0.0059 P8 GC+SHH+1d culture AAACCATTAA (3) 1.2 0.0012 3T3 fibroblasts GGACCTCCTG (4) 3.5 0.0035 E15 cortex GCCAAACCAA (5) 24.7 0.0247 E15 cortex GGACCTCCTG (4) 4.9 0.0049 P1 cortex GATACCATTA 4.5 0.0045 P1 cortex GCCAAACCAA (5) 4.5 0.0045 Hypothalamus GCCAAACCAA (5) 7.2 0.0072 Hypothalamus AGATAGATTT 5.4 0.0054 Hypothalamus GATACCATTA 3.6 0.0036 Hypothalamus GGTACATTAT (2) 3.6 0.0036 Hypothalamus CAATCCCAAC (2) 1.8 0.0018 Hypothalamus GGACCTCCTG (4) 1.8 0.0018 Hypothalamus TGGCCCACCC (3) 1.8 0.0018 E12.5 retina GCCAAACCAA (5) 35.7 0.0357 E12.5 retina AGATAGATTT 3.8 0.0038 E12.5 retina CAATCCCAAC (2) 3.8 0.0038 E12.5 retina AAACCATTAA (3) 1.9 0.0019 E12.5 retina GATACCATTA 1.9 0.0019 E12.5 retina GCTCTGATAC (3) 1.9 0.0019 E12.5 retina GGTACATTAT (2) 1.9 0.0019 E14.5 retina GCCAAACCAA (5) 16.4 0.0164 E14.5 retina GATACCATTA 1.8 0.0018 E14.5 retina GCTCTGATAC (3) 1.8 0.0018 E14.5 retina GGTACATTAT (2) 1.8 0.0018 E14.5 retina TGGCCCACCC (3) 1.8 0.0018 E16.5 retina GCCAAACCAA (5) 25.4 0.0254 E16.5 retina GATACCATTA 3.6 0.0036 E16.5 retina AGATAGATTT 1.8 0.0018 E16.5 retina CAATCCCAAC (2) 1.8 0.0018 E16.5 retina GCTCTGATAC (3) 1.8 0.0018 E16.5 retina GGTACATTAT (2) 1.8 0.0018 E18.5 retina GCCAAACCAA (5) 41.8 0.0418 E18.5 retina GGTACATTAT (2) 5.5 0.0055 P0.5 retina GCCAAACCAA (5) 19.6 0.0196 P0.5 retina AGATAGATTT 2 0.002 P0.5 retina GATACCATTA 2 0.002 P0.5 retina GGTACATTAT (2) 2 0.002 P2.5 retina GCCAAACCAA (5) 37 0.037 P2.5 retina AAACCATTAA (3) 1.8 0.0018 P2.5 retina GATACCATTA 1.8 0.0018 P2.5 retina TGGCCCACCC (3) 1.8 0.0018 P4.5 retina GCCAAACCAA (5) 31.7 0.0317 P4.5 retina GATACCATTA 5.9 0.0059 P4.5 retina AGATAGATTT 4 0.004 P4.5 retina CTATTCGGGA 4 0.004 P4.5 retina GCTCTGATAC (3) 2 0.002 P6.5 retina GCCAAACCAA (5) 23.3 0.0233 P6.5 retina AGATAGATTT 1.7 0.0017 P6.5 retina GATACCATTA 1.7 0.0017 P10.5 crx- retina GCCAAACCAA (5) 35.3 0.0353 P10.5 crx- retina GATACCATTA 9.3 0.0093 P10.5 crx- retina AGATAGATTT 5.6 0.0056 P10.5 crx- retina GCTCTGATAC (3) 1.9 0.0019 P10.5 crx- retina TGGCCCACCC (3) 1.9 0.0019 P10.5 crx+ retina GCCAAACCAA (5) 67.3 0.0673 P10.5 crx+ retina CAATCCCAAC (2) 1.9 0.0019 P10.5 crx+ retina GGTACATTAT (2) 1.9 0.0019 Adult retinal GCCAAACCAA (5) 31.5 0.0315 Adult retinal AGATAGATTT 3.7 0.0037 Adult retinal GATACCATTA 1.9 0.0019 ONL GCCAAACCAA (5) 28.7 0.0287 ONL GATACCATTA 3.8 0.0038 ONL AGATAGATTT 1.9 0.0019 ONL CAATCCCAAC (2) 1.9 0.0019 ONL GCTCTGATAC (3) 1.9 0.0019