Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.210155	Txnrd1	thioredoxin reductase 1	10		50493
Mm.210155	9130221J17Rik	RIKEN cDNA 9130221J17 gene	10		319693
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 111 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CATCGCCAGT (3) 22.8 0.0228 P8 Cb GC TATTTTTATT (5) 9.8 0.0098 P8 Cb GC CACCCAGACC (3) 4.9 0.0049 P8 Cb GC ATTAGTTACC (2) 3.3 0.0033 P8 Cb GC CTGGCTGAGG (9) 1.6 0.0016 P8 Cb GC GAGGAAAAAA (8) 1.6 0.0016 P8 Cb GC GCTGCTGGGG (6) 1.6 0.0016 P8 Cb GC GGAATGGACA (7) 1.6 0.0016 Cb medulloblastoma CATCGCCAGT (3) 50.9 0.0509 Cb medulloblastoma GCTCTTGGCT (5) 6.9 0.0069 Cb medulloblastoma CACCCAGACC (3) 4.6 0.0046 Cb medulloblastoma AAAGACCCAA (4) 2.3 0.0023 Cb medulloblastoma TATTTTTATT (5) 2.3 0.0023 P8 GC+1d culture CATCGCCAGT (3) 17.1 0.0171 P8 GC+1d culture TATTTTTATT (5) 10.3 0.0103 P8 GC+1d culture AAAGACCCAA (4) 1.1 0.0011 P8 GC+1d culture ATTAGTTACC (2) 1.1 0.0011 P8 GC+1d culture GGAATGGACA (7) 1.1 0.0011 P8 GC+SHH+1d culture TATTTTTATT (5) 24.6 0.0246 P8 GC+SHH+1d culture CATCGCCAGT (3) 14.1 0.0141 P8 GC+SHH+1d culture CACCCAGACC (3) 4.7 0.0047 P8 GC+SHH+1d culture AAAGACCCAA (4) 3.5 0.0035 P8 GC+SHH+1d culture GCTCTTGGGT (6) 2.3 0.0023 P8 GC+SHH+1d culture TTTTCCACCA (3) 2.3 0.0023 P8 GC+SHH+1d culture CTGGCTGAGG (9) 1.2 0.0012 P8 GC+SHH+1d culture GAGGAAAAAA (8) 1.2 0.0012 3T3 fibroblasts CTGGTGAGAC (8) 3.5 0.0035 E15 cortex CATCGCCAGT (3) 4.9 0.0049 P1 cortex CATCGCCAGT (3) 18.2 0.0182 P1 cortex GCTCTTGGCT (5) 4.5 0.0045 Hypothalamus CATCGCCAGT (3) 72.4 0.0724 Hypothalamus CTGGCTGAGG (9) 5.4 0.0054 Hypothalamus CACCCAGACC (3) 1.8 0.0018 Hypothalamus GGAATGGACA (7) 1.8 0.0018 Hypothalamus TATTTTTATT (5) 1.8 0.0018 E12.5 retina CATCGCCAGT (3) 5.6 0.0056 E12.5 retina ATTAGTTACC (2) 3.8 0.0038 E12.5 retina CACCCAGACC (3) 3.8 0.0038 E12.5 retina GCAGAGAGGT (2) 3.8 0.0038 E12.5 retina GAGGAAAAAA (8) 1.9 0.0019 E12.5 retina GCTGCTGGGG (6) 1.9 0.0019 E12.5 retina GTGGCTTTCA (8) 1.9 0.0019 E12.5 retina TATTTTTATT (5) 1.9 0.0019 E14.5 retina TATTTTTATT (5) 7.3 0.0073 E14.5 retina ATTAGTTACC (2) 5.5 0.0055 E14.5 retina CACCCAGACC (3) 5.5 0.0055 E14.5 retina CATCGCCAGT (3) 1.8 0.0018 E14.5 retina GAGGAAAAAA (8) 1.8 0.0018 E14.5 retina GCAGAGAGGT (2) 1.8 0.0018 E14.5 retina TTTTCCACCA (3) 1.8 0.0018 E16.5 retina TATTTTTATT (5) 12.7 0.0127 E16.5 retina CATCGCCAGT (3) 5.4 0.0054 E16.5 retina CACCCAGACC (3) 3.6 0.0036 E16.5 retina GAGGAAAAAA (8) 1.8 0.0018 E16.5 retina GCTCTTGGGT (6) 1.8 0.0018 E16.5 retina TGGATCTCTT (3) 1.8 0.0018 E18.5 retina CACCCAGACC (3) 12.7 0.0127 E18.5 retina CTATGTCTCT (3) 5.5 0.0055 E18.5 retina TATTTTTATT (5) 5.5 0.0055 E18.5 retina CATCGCCAGT (3) 1.8 0.0018 E18.5 retina CTGGTGAGAC (8) 1.8 0.0018 P0.5 retina CATCGCCAGT (3) 5.9 0.0059 P0.5 retina GCTGCTGGGG (6) 3.9 0.0039 P0.5 retina GTGGCTTTCA (8) 3.9 0.0039 P0.5 retina CACCCAGACC (3) 2 0.002 P0.5 retina CTATGTCTCT (3) 2 0.002 P0.5 retina TGGATCTCTT (3) 2 0.002 P2.5 retina CACCCAGACC (3) 5.3 0.0053 P2.5 retina CATCGCCAGT (3) 5.3 0.0053 P2.5 retina CTATGTCTCT (3) 1.8 0.0018 P2.5 retina GAGGAAAAAA (8) 1.8 0.0018 P2.5 retina GCAGAGAGGT (2) 1.8 0.0018 P2.5 retina GCTCTTGGCT (5) 1.8 0.0018 P2.5 retina GCTGCTGGGG (6) 1.8 0.0018 P2.5 retina TATTTTTATT (5) 1.8 0.0018 P4.5 retina CATCGCCAGT (3) 27.7 0.0277 P4.5 retina CACCCAGACC (3) 7.9 0.0079 P4.5 retina TATTTTTATT (5) 4 0.004 P4.5 retina CTATGTCTCT (3) 2 0.002 P4.5 retina TATTTTATAA (10) 2 0.002 P6.5 retina CATCGCCAGT (3) 33.3 0.0333 P6.5 retina CACCCAGACC (3) 5 0.005 P6.5 retina ATTAGTTACC (2) 3.3 0.0033 P6.5 retina TATTTTTATT (5) 3.3 0.0033 P6.5 retina CTATGTCTCT (3) 1.7 0.0017 P6.5 retina GAGGAAAAAA (8) 1.7 0.0017 P6.5 retina GCTCTTGGCT (5) 1.7 0.0017 P6.5 retina GCTGCTGGGG (6) 1.7 0.0017 P6.5 retina TATTTTATAA (10) 1.7 0.0017 P10.5 crx- retina CATCGCCAGT (3) 59.4 0.0594 P10.5 crx- retina CACCCAGACC (3) 3.7 0.0037 P10.5 crx- retina GCTCTTGGCT (5) 1.9 0.0019 P10.5 crx+ retina CATCGCCAGT (3) 30.8 0.0308 P10.5 crx+ retina CACCCAGACC (3) 3.8 0.0038 P10.5 crx+ retina GCAGAGAGGT (2) 1.9 0.0019 P10.5 crx+ retina GCTCTTGGCT (5) 1.9 0.0019 P10.5 crx+ retina TATTTTATAA (10) 1.9 0.0019 P10.5 crx+ retina TATTTTTATT (5) 1.9 0.0019 P10.5 crx+ retina TGGATCTCTT (3) 1.9 0.0019 Adult retinal CATCGCCAGT (3) 42.6 0.0426 Adult retinal GCTGCTGGGG (6) 11.1 0.0111 Adult retinal CACCCAGACC (3) 3.7 0.0037 Adult retinal GCTCTTGGCT (5) 3.7 0.0037 Adult retinal GAGGAAAAAA (8) 1.9 0.0019 ONL CATCGCCAGT (3) 5.7 0.0057 ONL ATTAGTTACC (2) 1.9 0.0019 ONL GAGGAAAAAA (8) 1.9 0.0019 ONL GCTGCTGGGG (6) 1.9 0.0019 ONL GGAATGGACA (7) 1.9 0.0019 ONL GTGGCTTTCA (8) 1.9 0.0019 ONL TATTTTTATT (5) 1.9 0.0019