Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.211211
D12Mgi15
DNA Segment, Chr 12, Mouse Genome Informatics 15
12
104928
Mm.211211
2310032D16Rik
RIKEN cDNA 2310032D16 gene
2
74182
Mm.211211
E030016H06Rik
RIKEN cDNA E030016H06 gene
2
402722
Mm.211211
Prei4
preimplantation protein 4
19071
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 98 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GTAGCTCACA (
30
)
16.3
0.0163
P8 Cb GC
CGCCACCAAA
(
7
)
8.2
0.0082
P8 Cb GC
CTTTTAGGAT
(
4
)
4.9
0.0049
P8 Cb GC
TATTGACAGA
(
4
)
3.3
0.0033
P8 Cb GC
CAGAAAAATA
(
5
)
1.6
0.0016
P8 Cb GC
CGCCACCACA (
11
)
1.6
0.0016
Cb medulloblastoma
GTAGCTCACA (
30
)
18.5
0.0185
Cb medulloblastoma
CGCCACCAAA
(
7
)
11.6
0.0116
Cb medulloblastoma
CGCCACCACA (
11
)
6.9
0.0069
Cb medulloblastoma
AGCAGAAATT
(
6
)
2.3
0.0023
P8 GC+1d culture
GTAGCTCACA (
30
)
27.4
0.0274
P8 GC+1d culture
TGTTGGTTCA
(
6
)
6.8
0.0068
P8 GC+1d culture
CTTTTAGGAT
(
4
)
4.6
0.0046
P8 GC+1d culture
CAGAAAAATA
(
5
)
2.3
0.0023
P8 GC+1d culture
CGCCACCAAA
(
7
)
2.3
0.0023
P8 GC+1d culture
CGCCACCACA (
11
)
2.3
0.0023
P8 GC+SHH+1d culture
GTAGCTCACA (
30
)
15.2
0.0152
P8 GC+SHH+1d culture
CGCCACCAAA
(
7
)
10.5
0.0105
P8 GC+SHH+1d culture
AGCAGAAATT
(
6
)
2.3
0.0023
P8 GC+SHH+1d culture
CAGAAAAATA
(
5
)
2.3
0.0023
P8 GC+SHH+1d culture
CGCCACCACA (
11
)
2.3
0.0023
P8 GC+SHH+1d culture
ACTTTAATAC
(
6
)
1.2
0.0012
P8 GC+SHH+1d culture
CTGTGGCTCT (
6
)
1.2
0.0012
P8 GC+SHH+1d culture
TATTGACAGA
(
4
)
1.2
0.0012
P8 GC+SHH+1d culture
TGTTGGTTCA
(
6
)
1.2
0.0012
3T3 fibroblasts
GTAGCTCACA (
30
)
14
0.014
3T3 fibroblasts
CGCCACCACA (
11
)
10.5
0.0105
3T3 fibroblasts
CGCCACCAAA
(
7
)
3.5
0.0035
E15 cortex
GTAGCTCACA (
30
)
29.7
0.0297
E15 cortex
CGCCACCACA (
11
)
4.9
0.0049
P1 cortex
GTAGCTCACA (
30
)
13.6
0.0136
P1 cortex
CGCCACCACA (
11
)
4.5
0.0045
Hypothalamus
GTAGCTCACA (
30
)
29
0.029
Hypothalamus
CGCCACCAAA
(
7
)
7.2
0.0072
Hypothalamus
ATCCAGAAAT
(
5
)
3.6
0.0036
Hypothalamus
CTGTGGCTCT (
6
)
1.8
0.0018
Hypothalamus
TATTGACAGA
(
4
)
1.8
0.0018
E12.5 retina
GTAGCTCACA (
30
)
30
0.03
E12.5 retina
CAGAAAAATA
(
5
)
1.9
0.0019
E12.5 retina
CGCCACCAAA
(
7
)
1.9
0.0019
E12.5 retina
CTGTGGCTCT (
6
)
1.9
0.0019
E12.5 retina
TGTTGGTTCA
(
6
)
1.9
0.0019
E14.5 retina
GTAGCTCACA (
30
)
31
0.031
E14.5 retina
CGCCACCAAA
(
7
)
3.6
0.0036
E14.5 retina
CGCCACCACA (
11
)
3.6
0.0036
E16.5 retina
GTAGCTCACA (
30
)
41.7
0.0417
E16.5 retina
CGCCACCAAA
(
7
)
12.7
0.0127
E16.5 retina
CTTTTAGGAT
(
4
)
3.6
0.0036
E16.5 retina
CAGAAAAATA
(
5
)
1.8
0.0018
E16.5 retina
CGCCACCACA (
11
)
1.8
0.0018
E16.5 retina
TGTTGGTTCA
(
6
)
1.8
0.0018
E18.5 retina
GTAGCTCACA (
30
)
16.4
0.0164
E18.5 retina
CGCCACCAAA
(
7
)
7.3
0.0073
E18.5 retina
CGCCACCACA (
11
)
3.6
0.0036
E18.5 retina
CTTTTAGGAT
(
4
)
3.6
0.0036
P0.5 retina
GTAGCTCACA (
30
)
25.5
0.0255
P0.5 retina
CGCCACCAAA
(
7
)
7.9
0.0079
P0.5 retina
CGCCACCACA (
11
)
7.9
0.0079
P0.5 retina
CAGAAAAATA
(
5
)
2
0.002
P2.5 retina
GTAGCTCACA (
30
)
22.9
0.0229
P2.5 retina
CGCCACCACA (
11
)
12.3
0.0123
P2.5 retina
CGCCACCAAA
(
7
)
8.8
0.0088
P2.5 retina
TATTGACAGA
(
4
)
3.5
0.0035
P2.5 retina
ACTTTAATAC
(
6
)
1.8
0.0018
P2.5 retina
AGCAGAAATT
(
6
)
1.8
0.0018
P2.5 retina
ATCCAGAAAT
(
5
)
1.8
0.0018
P2.5 retina
CTTTTAGGAT
(
4
)
1.8
0.0018
P4.5 retina
GTAGCTCACA (
30
)
25.8
0.0258
P4.5 retina
CGCCACCAAA
(
7
)
17.8
0.0178
P4.5 retina
CGCCACCACA (
11
)
4
0.004
P4.5 retina
CAGAAAAATA
(
5
)
2
0.002
P4.5 retina
CTTTTAGGAT
(
4
)
2
0.002
P4.5 retina
TATTGACAGA
(
4
)
2
0.002
P6.5 retina
GTAGCTCACA (
30
)
18.3
0.0183
P6.5 retina
CGCCACCAAA
(
7
)
8.3
0.0083
P6.5 retina
CGCCACCACA (
11
)
8.3
0.0083
P6.5 retina
ACTTTAATAC
(
6
)
1.7
0.0017
P6.5 retina
CTTTTAGGAT
(
4
)
1.7
0.0017
P6.5 retina
TATTGACAGA
(
4
)
1.7
0.0017
P10.5 crx- retina
GTAGCTCACA (
30
)
16.7
0.0167
P10.5 crx- retina
ACTTTAATAC
(
6
)
5.6
0.0056
P10.5 crx- retina
ATCCAGAAAT
(
5
)
5.6
0.0056
P10.5 crx- retina
CTTTTAGGAT
(
4
)
5.6
0.0056
P10.5 crx- retina
CGCCACCAAA
(
7
)
3.7
0.0037
P10.5 crx+ retina
GTAGCTCACA (
30
)
28.8
0.0288
P10.5 crx+ retina
CGCCACCAAA
(
7
)
5.8
0.0058
P10.5 crx+ retina
CTTTTAGGAT
(
4
)
3.8
0.0038
P10.5 crx+ retina
TGTTGGTTCA
(
6
)
3.8
0.0038
P10.5 crx+ retina
ATCCAGAAAT
(
5
)
1.9
0.0019
P10.5 crx+ retina
CAGAAAAATA
(
5
)
1.9
0.0019
Adult retinal
GTAGCTCACA (
30
)
16.7
0.0167
Adult retinal
CGCCACCAAA
(
7
)
9.3
0.0093
Adult retinal
CGCCACCACA (
11
)
5.6
0.0056
Adult retinal
TGTTGGTTCA
(
6
)
3.7
0.0037
ONL
GTAGCTCACA (
30
)
24.9
0.0249
ONL
CGCCACCACA (
11
)
1.9
0.0019
ONL
CTTTTAGGAT
(
4
)
1.9
0.0019
ONL
TATTGACAGA
(
4
)
1.9
0.0019
