Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.212606	C330018J07Rik	RIKEN cDNA C330018J07 gene	16		320184
Mm.212606	1810012N18Rik	RIKEN cDNA 1810012N18 gene	16		69110
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 80 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAGATCAAGA (18) 55.5 0.0555 P8 Cb GC GAGAAGATCT (13) 19.6 0.0196 P8 Cb GC AAATAAGTGG (4) 9.8 0.0098 P8 Cb GC AAGATCCTGA (11) 6.5 0.0065 P8 Cb GC GATGCCACAG (5) 6.5 0.0065 P8 Cb GC GATACTTGGG (3) 4.9 0.0049 P8 Cb GC TACCCAGGCA (8) 3.3 0.0033 P8 Cb GC AAGTGTGACG (3) 1.6 0.0016 P8 Cb GC TCTAGACTTG (2) 1.6 0.0016 Cb medulloblastoma AAGATCAAGA (18) 13.9 0.0139 Cb medulloblastoma AAATAAGTGG (4) 2.3 0.0023 Cb medulloblastoma AAGATCCTGA (11) 2.3 0.0023 Cb medulloblastoma GAGAAGATCT (13) 2.3 0.0023 P8 GC+1d culture AAGATCAAGA (18) 24 0.024 P8 GC+1d culture AAATAAGTGG (4) 2.3 0.0023 P8 GC+1d culture TCTAGACTTG (2) 2.3 0.0023 P8 GC+1d culture CTCTCTTAAA (3) 1.1 0.0011 P8 GC+1d culture GATACTTGGG (3) 1.1 0.0011 P8 GC+1d culture TACCCAGGCA (8) 1.1 0.0011 P8 GC+SHH+1d culture AAGATCAAGA (18) 17.6 0.0176 P8 GC+SHH+1d culture AAATAAGTGG (4) 2.3 0.0023 P8 GC+SHH+1d culture GAGAAGATCT (13) 2.3 0.0023 P8 GC+SHH+1d culture AAGATCCTGA (11) 1.2 0.0012 P8 GC+SHH+1d culture GATACTTGGG (3) 1.2 0.0012 P8 GC+SHH+1d culture TCTAGACTTG (2) 1.2 0.0012 3T3 fibroblasts AAGATCAAGA (18) 56.1 0.0561 3T3 fibroblasts AAGTGTGACG (3) 7 0.007 3T3 fibroblasts GAGAAGATCT (13) 7 0.007 3T3 fibroblasts TCTAGACTTG (2) 7 0.007 3T3 fibroblasts AAGATCCTGA (11) 3.5 0.0035 E15 cortex AAGATCAAGA (18) 94 0.094 E15 cortex TACCCAGGCA (8) 19.8 0.0198 E15 cortex AAATAAGTGG (4) 4.9 0.0049 E15 cortex AAGATCCTGA (11) 4.9 0.0049 E15 cortex AAGTGTGACG (3) 4.9 0.0049 E15 cortex GAGAAGATCT (13) 4.9 0.0049 P1 cortex AAGATCAAGA (18) 63.6 0.0636 P1 cortex GATACTTGGG (3) 18.2 0.0182 Hypothalamus AAGATCAAGA (18) 5.4 0.0054 Hypothalamus ACAGAAAGTG (9) 3.6 0.0036 Hypothalamus GATGCCACAG (5) 3.6 0.0036 Hypothalamus AAGATCCTGA (11) 1.8 0.0018 Hypothalamus GAGAAGATCT (13) 1.8 0.0018 E12.5 retina AAGATCAAGA (18) 50.7 0.0507 E12.5 retina TCTAGACTTG (2) 1.9 0.0019 E14.5 retina AAGATCAAGA (18) 7.3 0.0073 E14.5 retina AAATAAGTGG (4) 3.6 0.0036 E14.5 retina AAGATCCTGA (11) 1.8 0.0018 E14.5 retina AAGTGTGACG (3) 1.8 0.0018 E14.5 retina TACCCAGGCA (8) 1.8 0.0018 E16.5 retina AAGATCAAGA (18) 7.2 0.0072 E16.5 retina AAATAAGTGG (4) 3.6 0.0036 E16.5 retina TACCCAGGCA (8) 1.8 0.0018 E18.5 retina AAGATCAAGA (18) 7.3 0.0073 E18.5 retina TACCCAGGCA (8) 3.6 0.0036 E18.5 retina AAATAAGTGG (4) 1.8 0.0018 E18.5 retina GATACTTGGG (3) 1.8 0.0018 P0.5 retina AAGATCAAGA (18) 27.5 0.0275 P0.5 retina AAATAAGTGG (4) 2 0.002 P0.5 retina CTCTCTTAAA (3) 2 0.002 P0.5 retina TACCCAGGCA (8) 2 0.002 P0.5 retina TCTAGACTTG (2) 2 0.002 P2.5 retina AAGATCAAGA (18) 5.3 0.0053 P4.5 retina AAGATCAAGA (18) 11.9 0.0119 P4.5 retina ACAGAAAGTG (9) 2 0.002 P6.5 retina AAGATCAAGA (18) 6.7 0.0067 P6.5 retina CTCTCTTAAA (3) 1.7 0.0017 P6.5 retina GAGAAGATCT (13) 1.7 0.0017 P6.5 retina GATACTTGGG (3) 1.7 0.0017 P6.5 retina GATGCCACAG (5) 1.7 0.0017 P6.5 retina TACCCAGGCA (8) 1.7 0.0017 P10.5 crx- retina AAGATCAAGA (18) 1.9 0.0019 P10.5 crx- retina ACAGAAAGTG (9) 1.9 0.0019 P10.5 crx+ retina AAGATCAAGA (18) 11.5 0.0115 P10.5 crx+ retina GAGAAGATCT (13) 1.9 0.0019 P10.5 crx+ retina TACCCAGGCA (8) 1.9 0.0019 P10.5 crx+ retina TCTAGACTTG (2) 1.9 0.0019 Adult retinal AAGATCAAGA (18) 3.7 0.0037 ONL AAGATCAAGA (18) 5.7 0.0057 ONL CTCTCTTAAA (3) 1.9 0.0019