Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.216386	Snrp70	U1 small nuclear ribonucleoprotein polypeptide A	7	7 23.0 cM	20637
Gene Ontology	nucleus | ribonucleoprotein complex | RNA binding | spliceosome complex | viral nucleocapsid
Human Homolog	SNRP70[small nuclear ribonucleoprotein 70kDa polypeptide (RNP antigen)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 78 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTCCTAATCT (2) 9.8 0.0098 P8 Cb GC AAGAACTAGC (4) 1.6 0.0016 P8 Cb GC CCTGGTTCCC (8) 1.6 0.0016 Cb medulloblastoma AAGAACTAGC (4) 2.3 0.0023 Cb medulloblastoma CTCCTAATCT (2) 2.3 0.0023 P8 GC+1d culture CTCCTAATCT (2) 12.6 0.0126 P8 GC+1d culture AAGAACTAGC (4) 3.4 0.0034 P8 GC+SHH+1d culture CTCCTAATCT (2) 11.7 0.0117 P8 GC+SHH+1d culture AAGAACTAGC (4) 1.2 0.0012 P8 GC+SHH+1d culture ATCTACCATT (3) 1.2 0.0012 P8 GC+SHH+1d culture TCTCGACCAT 1.2 0.0012 3T3 fibroblasts CTCCTAATCT (2) 7 0.007 E15 cortex CTCCTAATCT (2) 19.8 0.0198 E15 cortex GAGGCAGAGG (4) 9.9 0.0099 P1 cortex CTCCTAATCT (2) 27.3 0.0273 P1 cortex AAGAACTAGC (4) 4.5 0.0045 P1 cortex ATCTACCATT (3) 4.5 0.0045 Hypothalamus CTCCTAATCT (2) 10.9 0.0109 Hypothalamus TCTCGACCAT 7.2 0.0072 Hypothalamus GAGGCAGAGG (4) 3.6 0.0036 Hypothalamus AAGAACTAGC (4) 1.8 0.0018 Hypothalamus TACCCATCAC (2) 1.8 0.0018 E12.5 retina CTCCTAATCT (2) 7.5 0.0075 E12.5 retina AAGAACTAGC (4) 1.9 0.0019 E12.5 retina CCTGGTTCCC (8) 1.9 0.0019 E14.5 retina CTCCTAATCT (2) 10.9 0.0109 E14.5 retina TACCCATCAC (2) 3.6 0.0036 E14.5 retina TCTCGACCAT 3.6 0.0036 E14.5 retina GCCCCAGAGA (2) 1.8 0.0018 E16.5 retina CTCCTAATCT (2) 14.5 0.0145 E16.5 retina TCTCGACCAT 3.6 0.0036 E16.5 retina ATCTACCATT (3) 1.8 0.0018 E16.5 retina GCCCCAGAGA (2) 1.8 0.0018 E16.5 retina TACCCATCAC (2) 1.8 0.0018 E18.5 retina CTCCTAATCT (2) 21.8 0.0218 E18.5 retina AAGAACTAGC (4) 1.8 0.0018 E18.5 retina GAGGCAGAGG (4) 1.8 0.0018 E18.5 retina TACCCATCAC (2) 1.8 0.0018 E18.5 retina TCCCTTTGAG (4) 1.8 0.0018 P0.5 retina CTCCTAATCT (2) 27.5 0.0275 P0.5 retina AAGAACTAGC (4) 2 0.002 P0.5 retina ATCTACCATT (3) 2 0.002 P0.5 retina CCTGGTTCCC (8) 2 0.002 P0.5 retina GAGGCAGAGG (4) 2 0.002 P0.5 retina GTCTTGCTGT (4) 2 0.002 P0.5 retina TCTCGACCAT 2 0.002 P2.5 retina CTCCTAATCT (2) 38.7 0.0387 P2.5 retina AAGAACTAGC (4) 3.5 0.0035 P2.5 retina TCTCGACCAT 3.5 0.0035 P2.5 retina ATCTACCATT (3) 1.8 0.0018 P2.5 retina GAGGCAGAGG (4) 1.8 0.0018 P2.5 retina TACCCATCAC (2) 1.8 0.0018 P2.5 retina TCCACTACAG 1.8 0.0018 P2.5 retina TCCCTTTGAG (4) 1.8 0.0018 P4.5 retina CTCCTAATCT (2) 31.7 0.0317 P4.5 retina AAGAACTAGC (4) 4 0.004 P4.5 retina CCTGGTTCCC (8) 4 0.004 P4.5 retina TCTCGACCAT 4 0.004 P4.5 retina ATCTACCATT (3) 2 0.002 P4.5 retina TCCACTACAG 2 0.002 P6.5 retina CTCCTAATCT (2) 25 0.025 P6.5 retina AAGAACTAGC (4) 6.7 0.0067 P6.5 retina ATCTACCATT (3) 1.7 0.0017 P6.5 retina TCCCTTTGAG (4) 1.7 0.0017 P6.5 retina TCTCGACCAT 1.7 0.0017 P10.5 crx- retina CTCCTAATCT (2) 14.9 0.0149 P10.5 crx- retina TCTCGACCAT 5.6 0.0056 P10.5 crx- retina AAGAACTAGC (4) 3.7 0.0037 P10.5 crx- retina GTCTTGCTGT (4) 1.9 0.0019 P10.5 crx- retina TACCCATCAC (2) 1.9 0.0019 P10.5 crx+ retina CTCCTAATCT (2) 5.8 0.0058 P10.5 crx+ retina AAGAACTAGC (4) 3.8 0.0038 P10.5 crx+ retina TACCCATCAC (2) 1.9 0.0019 Adult retinal CTCCTAATCT (2) 25.9 0.0259 Adult retinal TCCACTACAG 1.9 0.0019 Adult retinal TCTCGACCAT 1.9 0.0019 ONL CTCCTAATCT (2) 15.3 0.0153 ONL GCCCCAGAGA (2) 1.9 0.0019