Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.219040
Tcfcp2
transcription factor CP2
15
15 56.8 cM
21422
Mm.219040
D230015P20Rik
RIKEN cDNA D230015P20 gene
15
319662
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 57 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AAGTTTGTTT
(
4
)
13.1
0.0131
P8 Cb GC
GCGGGGAGAA
(
4
)
1.6
0.0016
P8 Cb GC
TAAAGTTTTA
(
2
)
1.6
0.0016
Cb medulloblastoma
AAGTTTGTTT
(
4
)
6.9
0.0069
Cb medulloblastoma
GAGGGATGTT (
14
)
2.3
0.0023
P8 GC+1d culture
AAGTTTGTTT
(
4
)
2.3
0.0023
P8 GC+1d culture
AAAAAGAGAA (
5
)
1.1
0.0011
P8 GC+SHH+1d culture
AAGTTTGTTT
(
4
)
10.5
0.0105
P8 GC+SHH+1d culture
GAGGGATGTT (
14
)
1.2
0.0012
3T3 fibroblasts
GAGGGATGTT (
14
)
3.5
0.0035
E15 cortex
GAGGGATGTT (
14
)
4.9
0.0049
E15 cortex
GCGGGGAGAA
(
4
)
4.9
0.0049
P1 cortex
TAAAGTTTTA
(
2
)
4.5
0.0045
Hypothalamus
AAGTTTGTTT
(
4
)
3.6
0.0036
Hypothalamus
AAAAAGAGAA (
5
)
1.8
0.0018
Hypothalamus
TAAAGTTTTA
(
2
)
1.8
0.0018
E12.5 retina
AAAAAGAGAA (
5
)
3.8
0.0038
E12.5 retina
AAGTTTGTTT
(
4
)
3.8
0.0038
E12.5 retina
GAGGGATGTT (
14
)
3.8
0.0038
E12.5 retina
GAGCCAGCAG (
6
)
1.9
0.0019
E14.5 retina
AAGTTTGTTT
(
4
)
27.3
0.0273
E14.5 retina
GAGGGATGTT (
14
)
23.7
0.0237
E14.5 retina
GAGCCAGCAG (
6
)
1.8
0.0018
E14.5 retina
TTCTTGCCTC
(
3
)
1.8
0.0018
E16.5 retina
GAGGGATGTT (
14
)
5.4
0.0054
E16.5 retina
AAGTTTGTTT
(
4
)
1.8
0.0018
E16.5 retina
TAAAGTTTTA
(
2
)
1.8
0.0018
E18.5 retina
AAGTTTGTTT
(
4
)
16.4
0.0164
E18.5 retina
GAGGGATGTT (
14
)
3.6
0.0036
E18.5 retina
TAAAGTTTTA
(
2
)
3.6
0.0036
P0.5 retina
GAGCCAGCAG (
6
)
3.9
0.0039
P0.5 retina
AAGTTTGTTT
(
4
)
2
0.002
P0.5 retina
GAGGGATGTT (
14
)
2
0.002
P2.5 retina
AAGTTTGTTT
(
4
)
12.3
0.0123
P2.5 retina
GAGGGATGTT (
14
)
1.8
0.0018
P4.5 retina
AAGTTTGTTT
(
4
)
7.9
0.0079
P4.5 retina
GAGGGATGTT (
14
)
5.9
0.0059
P4.5 retina
TAAAGTTTTA
(
2
)
2
0.002
P4.5 retina
TTCTTGCCTC
(
3
)
2
0.002
P6.5 retina
AAAAAGAGAA (
5
)
1.7
0.0017
P6.5 retina
GAGGGATGTT (
14
)
1.7
0.0017
P6.5 retina
TTCTTGCCTC
(
3
)
1.7
0.0017
P10.5 crx- retina
AAAAAGAGAA (
5
)
1.9
0.0019
P10.5 crx- retina
CACAAAGACA
(
4
)
1.9
0.0019
P10.5 crx- retina
GAGGGATGTT (
14
)
1.9
0.0019
P10.5 crx- retina
TAAAGTTTTA
(
2
)
1.9
0.0019
P10.5 crx+ retina
GAGGGATGTT (
14
)
3.8
0.0038
P10.5 crx+ retina
AAGTTTGTTT
(
4
)
1.9
0.0019
P10.5 crx+ retina
CACAAAGACA
(
4
)
1.9
0.0019
P10.5 crx+ retina
GCGGGGAGAA
(
4
)
1.9
0.0019
Adult retinal
AAGTTTGTTT
(
4
)
1.9
0.0019
Adult retinal
CACAAAGACA
(
4
)
1.9
0.0019
Adult retinal
GAGCCAGCAG (
6
)
1.9
0.0019
Adult retinal
GAGGGATGTT (
14
)
1.9
0.0019
ONL
GAGGGATGTT (
14
)
5.7
0.0057
ONL
AAGTTTGTTT
(
4
)
3.8
0.0038
ONL
CACAAAGACA
(
4
)
1.9
0.0019
