Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.220972
Tex27
testis expressed gene 27
17
21769
Mm.220972
D17Ertd277e
DNA segment, Chr 17, ERATO Doi 277, expressed
17
17 17.0 cM
52000
Mm.220972
Tuba-rs1
tubulin alpha, related sequence 1
17
26947
Mm.220972
C130068B02Rik
RIKEN cDNA C130068B02 gene
17
402752
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 90 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AAAATAAAAA (
28
)
6.5
0.0065
P8 Cb GC
AAATGGTGAC (
5
)
3.3
0.0033
P8 Cb GC
AAGGCCAGGC (
9
)
1.6
0.0016
P8 Cb GC
GGGCTTTGAT (
6
)
1.6
0.0016
P8 Cb GC
TGCCCAGGGA
(
7
)
1.6
0.0016
Cb medulloblastoma
AAAATAAAAA (
28
)
9.2
0.0092
Cb medulloblastoma
TGGTGGCCAA (
7
)
4.6
0.0046
Cb medulloblastoma
TGCCCAGGAC (
9
)
2.3
0.0023
P8 GC+1d culture
AAAATAAAAA (
28
)
8
0.008
P8 GC+1d culture
TGCCCAGGAC (
9
)
3.4
0.0034
P8 GC+1d culture
AAGGCCAGGC (
9
)
2.3
0.0023
P8 GC+1d culture
TGCCCAGGGA
(
7
)
2.3
0.0023
P8 GC+SHH+1d culture
AAAATAAAAA (
28
)
5.9
0.0059
P8 GC+SHH+1d culture
TGCCCAGGGA
(
7
)
3.5
0.0035
P8 GC+SHH+1d culture
TGCCAGGGAC (
5
)
2.3
0.0023
P8 GC+SHH+1d culture
TGCCCAGGAC (
9
)
2.3
0.0023
P8 GC+SHH+1d culture
AAGAATAAAA
(
5
)
1.2
0.0012
P8 GC+SHH+1d culture
AAGAATATTT (
10
)
1.2
0.0012
P8 GC+SHH+1d culture
AAGGCCAGGC (
9
)
1.2
0.0012
P8 GC+SHH+1d culture
TGGTGGCCAA (
7
)
1.2
0.0012
3T3 fibroblasts
TGCCAGGGAC (
5
)
3.5
0.0035
3T3 fibroblasts
TGCCCAGGAC (
9
)
3.5
0.0035
E15 cortex
TGCCCAGGAC (
9
)
4.9
0.0049
E15 cortex
TGCCCAGGGA
(
7
)
4.9
0.0049
P1 cortex
AAAATAAAAA (
28
)
9.1
0.0091
P1 cortex
TGCCCAGGGA
(
7
)
4.5
0.0045
Hypothalamus
TGCCCAGGAC (
9
)
5.4
0.0054
Hypothalamus
AAAATAAAAA (
28
)
3.6
0.0036
Hypothalamus
TGGTGGCCAA (
7
)
3.6
0.0036
Hypothalamus
TGCCCAGGGA
(
7
)
1.8
0.0018
E12.5 retina
AAAATAAAAA (
28
)
5.6
0.0056
E12.5 retina
TGCCAGGGAC (
5
)
5.6
0.0056
E12.5 retina
TGCCCAGGGA
(
7
)
5.6
0.0056
E12.5 retina
AAGAATAAAA
(
5
)
3.8
0.0038
E12.5 retina
CACAGACACA (
7
)
1.9
0.0019
E14.5 retina
AAAATAAAAA (
28
)
14.6
0.0146
E14.5 retina
TGGTGGCCAA (
7
)
3.6
0.0036
E14.5 retina
AAATGGTGAC (
5
)
1.8
0.0018
E14.5 retina
AAGAATAAAA
(
5
)
1.8
0.0018
E14.5 retina
GCAGCTGTAT (
5
)
1.8
0.0018
E14.5 retina
TGCCCAGGGA
(
7
)
1.8
0.0018
E16.5 retina
AAAATAAAAA (
28
)
10.9
0.0109
E16.5 retina
TGGTGGCCAA (
7
)
5.4
0.0054
E16.5 retina
AAATGGTGAC (
5
)
1.8
0.0018
E16.5 retina
AAGAATATTT (
10
)
1.8
0.0018
E16.5 retina
TGCCCAGGAC (
9
)
1.8
0.0018
E16.5 retina
TGCCCAGGGA
(
7
)
1.8
0.0018
E18.5 retina
AAAATAAAAA (
28
)
16.4
0.0164
E18.5 retina
AAGAATAAAA
(
5
)
7.3
0.0073
E18.5 retina
AAGAATATTT (
10
)
3.6
0.0036
E18.5 retina
GGGCTTTGAT (
6
)
3.6
0.0036
E18.5 retina
TGGTGGCCAA (
7
)
3.6
0.0036
E18.5 retina
AAATGGTGAC (
5
)
1.8
0.0018
E18.5 retina
GCAGCTGTAT (
5
)
1.8
0.0018
P0.5 retina
AAAATAAAAA (
28
)
5.9
0.0059
P0.5 retina
TGCCCAGGGA
(
7
)
5.9
0.0059
P0.5 retina
AAGGCCAGGC (
9
)
2
0.002
P0.5 retina
GCAGCTGTAT (
5
)
2
0.002
P0.5 retina
TGGTGGCCAA (
7
)
2
0.002
P2.5 retina
AAAATAAAAA (
28
)
19.4
0.0194
P2.5 retina
TGCCAGGGAC (
5
)
3.5
0.0035
P2.5 retina
GGGCTTTGAT (
6
)
1.8
0.0018
P4.5 retina
AAAATAAAAA (
28
)
21.8
0.0218
P4.5 retina
TGCCAGGGAC (
5
)
5.9
0.0059
P4.5 retina
TGCCCAGGAC (
9
)
4
0.004
P4.5 retina
AAGAATAAAA
(
5
)
2
0.002
P4.5 retina
TGCCCAGGGA
(
7
)
2
0.002
P4.5 retina
TGGTGGCCAA (
7
)
2
0.002
P6.5 retina
AAAATAAAAA (
28
)
11.7
0.0117
P6.5 retina
TGCCCAGGGA
(
7
)
5
0.005
P6.5 retina
GTCCCCAGAG (
7
)
3.3
0.0033
P6.5 retina
AAGAATAAAA
(
5
)
1.7
0.0017
P6.5 retina
CACAGACACA (
7
)
1.7
0.0017
P6.5 retina
GCAGCTGTAT (
5
)
1.7
0.0017
P10.5 crx- retina
AAAATAAAAA (
28
)
3.7
0.0037
P10.5 crx- retina
TGCCCAGGGA
(
7
)
3.7
0.0037
P10.5 crx- retina
TGGTGGCCAA (
7
)
3.7
0.0037
P10.5 crx- retina
AAGAATATTT (
10
)
1.9
0.0019
P10.5 crx+ retina
AAAATAAAAA (
28
)
1.9
0.0019
P10.5 crx+ retina
AAGGCCAGGC (
9
)
1.9
0.0019
P10.5 crx+ retina
CACAGACACA (
7
)
1.9
0.0019
Adult retinal
AAAATAAAAA (
28
)
1.9
0.0019
Adult retinal
AAGAATATTT (
10
)
1.9
0.0019
Adult retinal
GCAGCTGTAT (
5
)
1.9
0.0019
Adult retinal
GTCCCCAGAG (
7
)
1.9
0.0019
Adult retinal
TGCCAGGGAC (
5
)
1.9
0.0019
Adult retinal
TGCCCAGGAC (
9
)
1.9
0.0019
ONL
AAAATAAAAA (
28
)
11.5
0.0115
ONL
AAGAATAAAA
(
5
)
3.8
0.0038
ONL
AAGAATATTT (
10
)
3.8
0.0038
