Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.222272
Clasp2
CLIP associating protein 2
9
76499
Mm.222272
8030404L10Rik
RIKEN cDNA 8030404L10 gene
9
97514
Mm.222272
AU022707
expressed sequence AU022707
9
102681
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 66 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GCAGCTCACA (
24
)
8.2
0.0082
P8 Cb GC
ATGAGGCCCT
(
3
)
3.3
0.0033
P8 Cb GC
GGTCCTGATG
(
3
)
1.6
0.0016
Cb medulloblastoma
CAGAAGAAAA (
7
)
6.9
0.0069
Cb medulloblastoma
GCAGCTCACA (
24
)
6.9
0.0069
Cb medulloblastoma
TGTACGTGTG (
7
)
2.3
0.0023
Cb medulloblastoma
TTTGATGATG (
7
)
2.3
0.0023
P8 GC+1d culture
GCAGCTCACA (
24
)
10.3
0.0103
P8 GC+1d culture
CAGAAGAAAA (
7
)
2.3
0.0023
P8 GC+1d culture
GGTCCTGATG
(
3
)
2.3
0.0023
P8 GC+1d culture
ATGAGGCCCT
(
3
)
1.1
0.0011
P8 GC+1d culture
GCACTGACAG (
5
)
1.1
0.0011
P8 GC+1d culture
TTTGATGATG (
7
)
1.1
0.0011
P8 GC+SHH+1d culture
GCAGCTCACA (
24
)
10.5
0.0105
P8 GC+SHH+1d culture
CAGAAGAAAA (
7
)
4.7
0.0047
P8 GC+SHH+1d culture
ATGAGGCCCT
(
3
)
1.2
0.0012
3T3 fibroblasts
GCAGCTCACA (
24
)
14
0.014
3T3 fibroblasts
CAGAAGAAAA (
7
)
10.5
0.0105
3T3 fibroblasts
TGTACGTGTG (
7
)
3.5
0.0035
E15 cortex
GCAGCTCACA (
24
)
24.7
0.0247
E15 cortex
GGTCCTGATG
(
3
)
9.9
0.0099
E15 cortex
CAGAAGAAAA (
7
)
4.9
0.0049
P1 cortex
GCACTGACAG (
5
)
4.5
0.0045
P1 cortex
GCAGCTCACA (
24
)
4.5
0.0045
Hypothalamus
GCAGCTCACA (
24
)
5.4
0.0054
Hypothalamus
GGTCCTGATG
(
3
)
3.6
0.0036
Hypothalamus
CAGAAGAAAA (
7
)
1.8
0.0018
E12.5 retina
GCAGCTCACA (
24
)
9.4
0.0094
E12.5 retina
CAGAAGAAAA (
7
)
3.8
0.0038
E12.5 retina
GCACTGACAG (
5
)
1.9
0.0019
E12.5 retina
TGTACGTGTG (
7
)
1.9
0.0019
E14.5 retina
GCAGCTCACA (
24
)
40.1
0.0401
E16.5 retina
GCAGCTCACA (
24
)
23.5
0.0235
E16.5 retina
CAGAAGAAAA (
7
)
5.4
0.0054
E16.5 retina
ATGAGGCCCT
(
3
)
1.8
0.0018
E16.5 retina
TTTGATGATG (
7
)
1.8
0.0018
E18.5 retina
GCAGCTCACA (
24
)
14.6
0.0146
E18.5 retina
CAGAAGAAAA (
7
)
3.6
0.0036
E18.5 retina
GCACTGACAG (
5
)
1.8
0.0018
E18.5 retina
GGTCCTGATG
(
3
)
1.8
0.0018
P0.5 retina
GCAGCTCACA (
24
)
15.7
0.0157
P0.5 retina
CAGAAGAAAA (
7
)
5.9
0.0059
P0.5 retina
TTTGATGATG (
7
)
2
0.002
P2.5 retina
GCAGCTCACA (
24
)
7
0.007
P2.5 retina
ATGAGGCCCT
(
3
)
3.5
0.0035
P2.5 retina
GGTCCTGATG
(
3
)
1.8
0.0018
P4.5 retina
GCAGCTCACA (
24
)
5.9
0.0059
P4.5 retina
ATGAGGCCCT
(
3
)
2
0.002
P4.5 retina
GGTCCTGATG
(
3
)
2
0.002
P6.5 retina
GCAGCTCACA (
24
)
15
0.015
P6.5 retina
GGTCCTGATG
(
3
)
3.3
0.0033
P6.5 retina
ATGAGGCCCT
(
3
)
1.7
0.0017
P6.5 retina
CAGAAGAAAA (
7
)
1.7
0.0017
P10.5 crx- retina
GCAGCTCACA (
24
)
24.2
0.0242
P10.5 crx- retina
ATGAGGCCCT
(
3
)
1.9
0.0019
P10.5 crx- retina
GGTCCTGATG
(
3
)
1.9
0.0019
P10.5 crx+ retina
GCAGCTCACA (
24
)
17.3
0.0173
P10.5 crx+ retina
CAGAAGAAAA (
7
)
3.8
0.0038
P10.5 crx+ retina
GGTCCTGATG
(
3
)
3.8
0.0038
P10.5 crx+ retina
ATGAGGCCCT
(
3
)
1.9
0.0019
P10.5 crx+ retina
GCACTGACAG (
5
)
1.9
0.0019
P10.5 crx+ retina
TGTACGTGTG (
7
)
1.9
0.0019
Adult retinal
GCAGCTCACA (
24
)
18.5
0.0185
Adult retinal
ATGAGGCCCT
(
3
)
3.7
0.0037
ONL
GCAGCTCACA (
24
)
7.7
0.0077
ONL
GGTCCTGATG
(
3
)
3.8
0.0038
