Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.224076
BC002230
cDNA sequence BC002230
12
217827
Mm.224076
6720454P05Rik
RIKEN cDNA 6720454P05 gene
12
320288
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 55 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GCAGCTCACA (
24
)
8.2
0.0082
P8 Cb GC
GAGGCTCACA (
9
)
4.9
0.0049
Cb medulloblastoma
GCAGCTCACA (
24
)
6.9
0.0069
Cb medulloblastoma
GAGGCTCACA (
9
)
4.6
0.0046
P8 GC+1d culture
GCAGCTCACA (
24
)
10.3
0.0103
P8 GC+1d culture
GAGTATTTCC
(
2
)
3.4
0.0034
P8 GC+1d culture
GAGGCTCACA (
9
)
2.3
0.0023
P8 GC+1d culture
TATATGTGTA (
10
)
2.3
0.0023
P8 GC+SHH+1d culture
GCAGCTCACA (
24
)
10.5
0.0105
P8 GC+SHH+1d culture
TATATGTGTA (
10
)
4.7
0.0047
P8 GC+SHH+1d culture
GAGGCTCACA (
9
)
3.5
0.0035
3T3 fibroblasts
GCAGCTCACA (
24
)
14
0.014
E15 cortex
GAGGCTCACA (
9
)
34.6
0.0346
E15 cortex
GCAGCTCACA (
24
)
24.7
0.0247
P1 cortex
GAGGCTCACA (
9
)
13.6
0.0136
P1 cortex
GCAGCTCACA (
24
)
4.5
0.0045
Hypothalamus
GAGGCTCACA (
9
)
7.2
0.0072
Hypothalamus
GCAGCTCACA (
24
)
5.4
0.0054
Hypothalamus
TATATGTGTA (
10
)
1.8
0.0018
E12.5 retina
GAGGCTCACA (
9
)
15
0.015
E12.5 retina
GCAGCTCACA (
24
)
9.4
0.0094
E12.5 retina
GCCTTTTTTC (
3
)
3.8
0.0038
E12.5 retina
GAGTATTTCC
(
2
)
1.9
0.0019
E14.5 retina
GCAGCTCACA (
24
)
40.1
0.0401
E14.5 retina
GAGGCTCACA (
9
)
23.7
0.0237
E16.5 retina
GCAGCTCACA (
24
)
23.5
0.0235
E16.5 retina
GAGGCTCACA (
9
)
21.7
0.0217
E16.5 retina
TATATGTGTA (
10
)
3.6
0.0036
E18.5 retina
GCAGCTCACA (
24
)
14.6
0.0146
E18.5 retina
GAGGCTCACA (
9
)
10.9
0.0109
P0.5 retina
GCAGCTCACA (
24
)
15.7
0.0157
P0.5 retina
GAGGCTCACA (
9
)
11.8
0.0118
P0.5 retina
GAGTATTTCC
(
2
)
2
0.002
P0.5 retina
TATATGTGTA (
10
)
2
0.002
P2.5 retina
GAGGCTCACA (
9
)
7
0.007
P2.5 retina
GCAGCTCACA (
24
)
7
0.007
P2.5 retina
GAGTATTTCC
(
2
)
3.5
0.0035
P2.5 retina
TATATGTGTA (
10
)
1.8
0.0018
P4.5 retina
GAGGCTCACA (
9
)
9.9
0.0099
P4.5 retina
GCAGCTCACA (
24
)
5.9
0.0059
P6.5 retina
GCAGCTCACA (
24
)
15
0.015
P6.5 retina
GAGGCTCACA (
9
)
10
0.01
P6.5 retina
GAGTATTTCC
(
2
)
1.7
0.0017
P10.5 crx- retina
GCAGCTCACA (
24
)
24.2
0.0242
P10.5 crx- retina
GAGGCTCACA (
9
)
13
0.013
P10.5 crx- retina
GAGTATTTCC
(
2
)
3.7
0.0037
P10.5 crx- retina
TATATGTGTA (
10
)
1.9
0.0019
P10.5 crx+ retina
GCAGCTCACA (
24
)
17.3
0.0173
P10.5 crx+ retina
GAGGCTCACA (
9
)
5.8
0.0058
Adult retinal
GCAGCTCACA (
24
)
18.5
0.0185
Adult retinal
GAGGCTCACA (
9
)
7.4
0.0074
Adult retinal
GAGTATTTCC
(
2
)
1.9
0.0019
ONL
GAGGCTCACA (
9
)
7.7
0.0077
ONL
GCAGCTCACA (
24
)
7.7
0.0077
ONL
GCCTTTTTTC (
3
)
1.9
0.0019
