Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.22448	Ckap2	cytoskeleton associated protein 2	8		80986
Gene Ontology	biological_process unknown | cellular_component unknown | molecular_function unknown
Human Homolog	CKAP2[cytoskeleton associated protein 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 40 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACAAAAAAAA (31) 6.5 0.0065 P8 Cb GC CCTAAGTATG 4.9 0.0049 P8 Cb GC CCTTTAATCT (38) 4.9 0.0049 Cb medulloblastoma ACAAAAAAAA (31) 34.7 0.0347 P8 GC+1d culture ACAAAAAAAA (31) 5.7 0.0057 P8 GC+1d culture CCTTTAATCT (38) 1.1 0.0011 P8 GC+SHH+1d culture ACAAAAAAAA (31) 14.1 0.0141 P8 GC+SHH+1d culture CCTTTAATCT (38) 3.5 0.0035 3T3 fibroblasts CCTTTAATCT (38) 10.5 0.0105 3T3 fibroblasts CCTAAGTATG 7 0.007 E15 cortex ACAAAAAAAA (31) 4.9 0.0049 P1 cortex ACAAAAAAAA (31) 4.5 0.0045 P1 cortex CCTTTAATCT (38) 4.5 0.0045 Hypothalamus ACAAAAAAAA (31) 10.9 0.0109 Hypothalamus CCTTTAATCT (38) 1.8 0.0018 E12.5 retina CCTAAGTATG 3.8 0.0038 E12.5 retina GCAAAGTTGA 3.8 0.0038 E12.5 retina ACAAAAAAAA (31) 1.9 0.0019 E12.5 retina CCTTTAATCT (38) 1.9 0.0019 E14.5 retina CCTTTAATCT (38) 12.8 0.0128 E14.5 retina ACAAAAAAAA (31) 5.5 0.0055 E16.5 retina CCTAAGTATG 5.4 0.0054 E16.5 retina ACAAAAAAAA (31) 1.8 0.0018 E18.5 retina ACAAAAAAAA (31) 14.6 0.0146 P0.5 retina ACAAAAAAAA (31) 5.9 0.0059 P0.5 retina CCTAAGTATG 2 0.002 P0.5 retina CCTTTAATCT (38) 2 0.002 P2.5 retina ACAAAAAAAA (31) 5.3 0.0053 P2.5 retina CCTTTAATCT (38) 3.5 0.0035 P2.5 retina CCTAAGTATG 1.8 0.0018 P4.5 retina ACAAAAAAAA (31) 5.9 0.0059 P4.5 retina CCTTTAATCT (38) 4 0.004 P6.5 retina CCTTTAATCT (38) 11.7 0.0117 P6.5 retina ACAAAAAAAA (31) 1.7 0.0017 P6.5 retina GCAAAGTTGA 1.7 0.0017 P10.5 crx- retina ACAAAAAAAA (31) 1.9 0.0019 P10.5 crx+ retina ACAAAAAAAA (31) 11.5 0.0115 Adult retinal CCTTTAATCT (38) 7.4 0.0074 ONL CCTTTAATCT (38) 11.5 0.0115 ONL ACAAAAAAAA (31) 5.7 0.0057