Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.227	D430040G12Rik	RIKEN cDNA D430040G12 gene	2		320903
Mm.227	Itgav	integrin alpha V	2	2 46.0 cM	16410
Gene Ontology	angiogenesis | blood vessel development | cell adhesion | cell-matrix adhesion | integral to membrane | integrin complex | integrin-mediated signaling pathway | protein binding | receptor activity
Human Homolog	ITGAV[integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 50 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTCTGCTTTG (4) 9.8 0.0098 P8 Cb GC AAACCCTGTC (15) 3.3 0.0033 P8 Cb GC GTACCTGCTT (3) 3.3 0.0033 Cb medulloblastoma GTACCTGCTT (3) 4.6 0.0046 Cb medulloblastoma TTCTGCTTTG (4) 4.6 0.0046 Cb medulloblastoma TTTTAAAAGT (4) 4.6 0.0046 Cb medulloblastoma GATTTTCTTT (3) 2.3 0.0023 P8 GC+1d culture TTCTGCTTTG (4) 5.7 0.0057 P8 GC+1d culture AAACCCTGTC (15) 3.4 0.0034 P8 GC+1d culture GTACCTGCTT (3) 3.4 0.0034 P8 GC+1d culture GACTTCCTGT (5) 2.3 0.0023 P8 GC+SHH+1d culture TTCTGCTTTG (4) 8.2 0.0082 P8 GC+SHH+1d culture GTACCTGCTT (3) 3.5 0.0035 P8 GC+SHH+1d culture AAACCCTGTC (15) 1.2 0.0012 3T3 fibroblasts GTACCTGCTT (3) 3.5 0.0035 3T3 fibroblasts TTCTGCTTTG (4) 3.5 0.0035 P1 cortex AAACCCTGTC (15) 4.5 0.0045 P1 cortex TTCTGCTTTG (4) 4.5 0.0045 P1 cortex TTTTAAAAGT (4) 4.5 0.0045 E14.5 retina AAACCCTGTC (15) 3.6 0.0036 E14.5 retina TTCTGCTTTG (4) 3.6 0.0036 E14.5 retina GTACCTGCTT (3) 1.8 0.0018 E16.5 retina AAACCCTGTC (15) 1.8 0.0018 E16.5 retina GTACCTGCTT (3) 1.8 0.0018 E16.5 retina TTCTGCTTTG (4) 1.8 0.0018 E18.5 retina AAACCCTGTC (15) 1.8 0.0018 E18.5 retina TTCTGCTTTG (4) 1.8 0.0018 E18.5 retina TTTTAAAAGT (4) 1.8 0.0018 P0.5 retina AAACCCTGTC (15) 3.9 0.0039 P0.5 retina GATTTTCTTT (3) 2 0.002 P0.5 retina GTACCTGCTT (3) 2 0.002 P0.5 retina TTCTGCTTTG (4) 2 0.002 P2.5 retina TTCTGCTTTG (4) 5.3 0.0053 P2.5 retina AAACCCTGTC (15) 1.8 0.0018 P2.5 retina GTACCTGCTT (3) 1.8 0.0018 P4.5 retina TTCTGCTTTG (4) 4 0.004 P4.5 retina GTACCTGCTT (3) 2 0.002 P4.5 retina TTTTAAAAGT (4) 2 0.002 P6.5 retina TTCTGCTTTG (4) 3.3 0.0033 P6.5 retina TTTTAAAAGT (4) 3.3 0.0033 P10.5 crx- retina GTACCTGCTT (3) 3.7 0.0037 P10.5 crx- retina AAACCCTGTC (15) 1.9 0.0019 P10.5 crx+ retina AAACCCTGTC (15) 3.8 0.0038 P10.5 crx+ retina TTCTGCTTTG (4) 3.8 0.0038 P10.5 crx+ retina GACTTCCTGT (5) 1.9 0.0019 P10.5 crx+ retina GTACCTGCTT (3) 1.9 0.0019 P10.5 crx+ retina TTTTAAAAGT (4) 1.9 0.0019 Adult retinal AAACCCTGTC (15) 3.7 0.0037 Adult retinal GTACCTGCTT (3) 1.9 0.0019 ONL GACTTCCTGT (5) 1.9 0.0019