Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.2314	Prkcd	protein kinase C, delta	14	14 11.0 cM	18753
Gene Ontology	ATP binding | B-cell proliferation | diacylglycerol binding | humoral defense mechanism (sensu Vertebrata) | intracellular signaling cascade | membrane | protein amino acid phosphorylation | protein kinase activity | protein serine/threonine kinase activity | transferase activity
Human Homolog	PRKCD[protein kinase C, delta]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 65 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TAGGAGACTG (2) 3.3 0.0033 P8 Cb GC CCTTTAGTCC (27) 1.6 0.0016 P8 Cb GC CTGTGTATGT (4) 1.6 0.0016 P8 Cb GC GCCCCCTTCC (12) 1.6 0.0016 P8 Cb GC TAGGAAACTG (2) 1.6 0.0016 Cb medulloblastoma TAGGAGACTG (2) 6.9 0.0069 Cb medulloblastoma GCCCCCTTCC (12) 2.3 0.0023 P8 GC+1d culture CCTTTAGTCC (27) 10.3 0.0103 P8 GC+1d culture GCCCCCTTCC (12) 2.3 0.0023 P8 GC+1d culture TAGGAAACTG (2) 1.1 0.0011 P8 GC+1d culture TGTGTATGTG (9) 1.1 0.0011 P8 GC+SHH+1d culture CCTTTAGTCC (27) 3.5 0.0035 P8 GC+SHH+1d culture GCCCCCTTCC (12) 2.3 0.0023 P8 GC+SHH+1d culture TAGGAGACTG (2) 2.3 0.0023 P8 GC+SHH+1d culture TAACAGAAAT (2) 1.2 0.0012 3T3 fibroblasts GCCCCCTTCC (12) 35 0.035 E15 cortex CCTTTAGTCC (27) 9.9 0.0099 E15 cortex TAGGAGACTG (2) 9.9 0.0099 E15 cortex TAACAGAAAT (2) 4.9 0.0049 P1 cortex CCTTTAGTCC (27) 27.3 0.0273 P1 cortex CTGTGTATGT (4) 4.5 0.0045 P1 cortex TAACAGAAAT (2) 4.5 0.0045 P1 cortex TAGGAGACTG (2) 4.5 0.0045 Hypothalamus TAGGAGACTG (2) 32.6 0.0326 Hypothalamus TAACAGAAAT (2) 5.4 0.0054 Hypothalamus CCTTTAGTCC (27) 3.6 0.0036 Hypothalamus TAGGAAACTG (2) 1.8 0.0018 E12.5 retina CCTTTAGTCC (27) 5.6 0.0056 E12.5 retina TAGGAGACTG (2) 3.8 0.0038 E12.5 retina GCCCCCTTCC (12) 1.9 0.0019 E14.5 retina CCTTTAGTCC (27) 14.6 0.0146 E14.5 retina TAGGAGACTG (2) 10.9 0.0109 E14.5 retina TAACAGAAAT (2) 3.6 0.0036 E14.5 retina GCTTCTCCTT (8) 1.8 0.0018 E16.5 retina TAGGAGACTG (2) 9.1 0.0091 E16.5 retina CCTTTAGTCC (27) 5.4 0.0054 E16.5 retina GCTTCTCCTT (8) 1.8 0.0018 E16.5 retina TAACAGAAAT (2) 1.8 0.0018 E18.5 retina CCTTTAGTCC (27) 5.5 0.0055 P0.5 retina CCTTTAGTCC (27) 7.9 0.0079 P0.5 retina TAGGAGACTG (2) 3.9 0.0039 P0.5 retina GCTTCTCCTT (8) 2 0.002 P2.5 retina CCTTTAGTCC (27) 5.3 0.0053 P2.5 retina TAGGAGACTG (2) 1.8 0.0018 P4.5 retina CCTTTAGTCC (27) 4 0.004 P4.5 retina GCCCCCTTCC (12) 2 0.002 P6.5 retina CCTTTAGTCC (27) 3.3 0.0033 P6.5 retina TAGGAGACTG (2) 1.7 0.0017 P6.5 retina TGTGTATGTG (9) 1.7 0.0017 P10.5 crx- retina GCCCCCTTCC (12) 3.7 0.0037 P10.5 crx- retina CCTTTAGTCC (27) 1.9 0.0019 P10.5 crx- retina TAACAGAAAT (2) 1.9 0.0019 P10.5 crx- retina TAGGAGACTG (2) 1.9 0.0019 P10.5 crx+ retina CCTTTAGTCC (27) 5.8 0.0058 P10.5 crx+ retina GCCCCCTTCC (12) 1.9 0.0019 P10.5 crx+ retina TAACAGAAAT (2) 1.9 0.0019 P10.5 crx+ retina TAGGAGACTG (2) 1.9 0.0019 P10.5 crx+ retina TGTGTATGTG (9) 1.9 0.0019 Adult retinal CCTTTAGTCC (27) 3.7 0.0037 Adult retinal GCCCCCTTCC (12) 3.7 0.0037 Adult retinal TAGGAGACTG (2) 3.7 0.0037 Adult retinal TGTGTATGTG (9) 3.7 0.0037 ONL CCTTTAGTCC (27) 7.7 0.0077 ONL CTGTGTATGT (4) 1.9 0.0019 ONL TGTGTATGTG (9) 1.9 0.0019