Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.234204	5330420P17Rik	RIKEN cDNA 5330420P17 gene	16		77101
Mm.234204	Pak2	p21 (CDKN1A)-activated kinase 2	16	16 21.2 cM	224105
Gene Ontology	ATP binding | kinase activity | protein amino acid phosphorylation | protein kinase activity | protein serine/threonine kinase activity | transferase activity
Human Homolog	PAK2[p21 (CDKN1A)-activated kinase 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 80 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TCCATTGCTG (5) 4.9 0.0049 P8 Cb GC ATGTTTGTGC (18) 3.3 0.0033 P8 Cb GC GAGAAAAAAA (18) 3.3 0.0033 P8 Cb GC GAGGAAAAAA (8) 1.6 0.0016 P8 Cb GC GTGCAGCAAG (3) 1.6 0.0016 Cb medulloblastoma GAGAAAAAAA (18) 11.6 0.0116 Cb medulloblastoma TCCATTGCTG (5) 6.9 0.0069 Cb medulloblastoma CGAGCTCCTT (2) 2.3 0.0023 Cb medulloblastoma GTGCAGCAAG (3) 2.3 0.0023 Cb medulloblastoma TTGGCTTTGA (3) 2.3 0.0023 P8 GC+1d culture GAGAAAAAAA (18) 4.6 0.0046 P8 GC+1d culture TCCATTGCTG (5) 3.4 0.0034 P8 GC+1d culture AAAGTTTATT (3) 1.1 0.0011 P8 GC+1d culture ATGTTTGTGC (18) 1.1 0.0011 P8 GC+1d culture CACAAAGCCC (2) 1.1 0.0011 P8 GC+1d culture GTGCAGCAAG (3) 1.1 0.0011 P8 GC+1d culture TCCATTTTCT (5) 1.1 0.0011 P8 GC+SHH+1d culture GAGAAAAAAA (18) 3.5 0.0035 P8 GC+SHH+1d culture CACAAAGCCC (2) 2.3 0.0023 P8 GC+SHH+1d culture ATGTTTGTGC (18) 1.2 0.0012 P8 GC+SHH+1d culture GAGGAAAAAA (8) 1.2 0.0012 P8 GC+SHH+1d culture GTGCAGCAAG (3) 1.2 0.0012 3T3 fibroblasts ATGTTTGTGC (18) 3.5 0.0035 E15 cortex TCTGATAACG (2) 9.9 0.0099 E15 cortex ATGTTTGTGC (18) 4.9 0.0049 P1 cortex AAAGTTTATT (3) 4.5 0.0045 P1 cortex ATGTTTGTGC (18) 4.5 0.0045 P1 cortex CACAAAGCCC (2) 4.5 0.0045 P1 cortex GAGAAAAAAA (18) 4.5 0.0045 P1 cortex TCCATTGCTG (5) 4.5 0.0045 Hypothalamus ATGTTTGTGC (18) 1.8 0.0018 Hypothalamus CACAAAGCCC (2) 1.8 0.0018 Hypothalamus GAGAAAAAAA (18) 1.8 0.0018 E12.5 retina TCCATTGCTG (5) 3.8 0.0038 E12.5 retina GAGGAAAAAA (8) 1.9 0.0019 E14.5 retina ATGTTTGTGC (18) 27.3 0.0273 E14.5 retina GAGAAAAAAA (18) 9.1 0.0091 E14.5 retina CACAAAGCCC (2) 1.8 0.0018 E14.5 retina GAGGAAAAAA (8) 1.8 0.0018 E16.5 retina ATGTTTGTGC (18) 7.2 0.0072 E16.5 retina GAGAAAAAAA (18) 1.8 0.0018 E16.5 retina GAGGAAAAAA (8) 1.8 0.0018 E16.5 retina TCTGATAACG (2) 1.8 0.0018 E18.5 retina GAGAAAAAAA (18) 1.8 0.0018 E18.5 retina TCCATTTTCT (5) 1.8 0.0018 P0.5 retina TCCATTGCTG (5) 5.9 0.0059 P0.5 retina ATGTTTGTGC (18) 2 0.002 P0.5 retina GAGAAAAAAA (18) 2 0.002 P0.5 retina TTGGCTTTGA (3) 2 0.002 P2.5 retina ATGTTTGTGC (18) 3.5 0.0035 P2.5 retina GAGAAAAAAA (18) 3.5 0.0035 P2.5 retina GAGGAAAAAA (8) 1.8 0.0018 P2.5 retina GTGCAGCAAG (3) 1.8 0.0018 P2.5 retina TCCATTGCTG (5) 1.8 0.0018 P2.5 retina TTGGCTTTGA (3) 1.8 0.0018 P4.5 retina GAGAAAAAAA (18) 5.9 0.0059 P4.5 retina TCCATTGCTG (5) 5.9 0.0059 P4.5 retina TCCATTTTCT (5) 2 0.002 P6.5 retina ATGTTTGTGC (18) 3.3 0.0033 P6.5 retina GAGAAAAAAA (18) 3.3 0.0033 P6.5 retina TCCATTGCTG (5) 3.3 0.0033 P6.5 retina AAAGTTTATT (3) 1.7 0.0017 P6.5 retina CACAAAGCCC (2) 1.7 0.0017 P6.5 retina CGAGCTCCTT (2) 1.7 0.0017 P6.5 retina GAGGAAAAAA (8) 1.7 0.0017 P6.5 retina TCCATTTTCT (5) 1.7 0.0017 P10.5 crx- retina TCCATTGCTG (5) 9.3 0.0093 P10.5 crx- retina ATGTTTGTGC (18) 1.9 0.0019 P10.5 crx- retina GAGAAAAAAA (18) 1.9 0.0019 P10.5 crx+ retina GAGAAAAAAA (18) 7.7 0.0077 P10.5 crx+ retina ATGTTTGTGC (18) 3.8 0.0038 P10.5 crx+ retina CACAAAGCCC (2) 1.9 0.0019 P10.5 crx+ retina CGAGCTCCTT (2) 1.9 0.0019 Adult retinal TCCATTGCTG (5) 9.3 0.0093 Adult retinal ATGTTTGTGC (18) 1.9 0.0019 Adult retinal GAGGAAAAAA (8) 1.9 0.0019 ONL ATGTTTGTGC (18) 7.7 0.0077 ONL TCCATTGCTG (5) 3.8 0.0038 ONL GAGAAAAAAA (18) 1.9 0.0019 ONL GAGGAAAAAA (8) 1.9 0.0019