Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.235013
9130024F11Rik
RIKEN cDNA 9130024F11 gene
1
78900
Mm.235013
B530002L08
hypothetical protein B530002L08
1
329160
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 41 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TATATTAAAT
(
5
)
4.9
0.0049
P8 Cb GC
GTGCAGGAGG (
18
)
1.6
0.0016
P8 Cb GC
TTTTTCCCAA
(
4
)
1.6
0.0016
Cb medulloblastoma
TATATTAAAT
(
5
)
90.2
0.0902
P8 GC+1d culture
TATATTAAAT
(
5
)
21.7
0.0217
P8 GC+1d culture
GTGCAGGAGG (
18
)
4.6
0.0046
P8 GC+1d culture
TTTTTCCCAA
(
4
)
2.3
0.0023
P8 GC+SHH+1d culture
TATATTAAAT
(
5
)
11.7
0.0117
3T3 fibroblasts
GTGCAGGAGG (
18
)
3.5
0.0035
E15 cortex
GTGCAGGAGG (
18
)
14.8
0.0148
P1 cortex
TATATTAAAT
(
5
)
18.2
0.0182
P1 cortex
TTTTTCCCAA
(
4
)
4.5
0.0045
Hypothalamus
TATATTAAAT
(
5
)
110.5
0.1105
Hypothalamus
GTGCAGGAGG (
18
)
3.6
0.0036
E12.5 retina
TATATTAAAT
(
5
)
5.6
0.0056
E12.5 retina
GTGCAGGAGG (
18
)
1.9
0.0019
E14.5 retina
TATATTAAAT
(
5
)
12.8
0.0128
E14.5 retina
GTGCAGGAGG (
18
)
9.1
0.0091
E14.5 retina
GCAGGGATGG
(
3
)
3.6
0.0036
E16.5 retina
TATATTAAAT
(
5
)
10.9
0.0109
E16.5 retina
GTGCAGGAGG (
18
)
5.4
0.0054
E16.5 retina
TTTTTCCCAA
(
4
)
1.8
0.0018
E18.5 retina
TATATTAAAT
(
5
)
18.2
0.0182
E18.5 retina
GTGCAGGAGG (
18
)
7.3
0.0073
E18.5 retina
TTTTTCCCAA
(
4
)
1.8
0.0018
P0.5 retina
TATATTAAAT
(
5
)
2
0.002
P2.5 retina
TATATTAAAT
(
5
)
31.7
0.0317
P2.5 retina
GCAGGGATGG
(
3
)
1.8
0.0018
P2.5 retina
GTGCAGGAGG (
18
)
1.8
0.0018
P4.5 retina
TATATTAAAT
(
5
)
17.8
0.0178
P4.5 retina
GTGCAGGAGG (
18
)
2
0.002
P6.5 retina
TATATTAAAT
(
5
)
51.7
0.0517
P6.5 retina
GTGCAGGAGG (
18
)
5
0.005
P10.5 crx- retina
TATATTAAAT
(
5
)
35.3
0.0353
P10.5 crx- retina
TTTTTCCCAA
(
4
)
1.9
0.0019
P10.5 crx+ retina
TATATTAAAT
(
5
)
21.1
0.0211
P10.5 crx+ retina
GTGCAGGAGG (
18
)
1.9
0.0019
Adult retinal
TATATTAAAT
(
5
)
18.5
0.0185
Adult retinal
GTGCAGGAGG (
18
)
5.6
0.0056
ONL
TATATTAAAT
(
5
)
17.2
0.0172
ONL
GTGCAGGAGG (
18
)
3.8
0.0038
