Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.236878	4933439C20Rik	RIKEN cDNA 4933439C20 gene	17		66776
Mm.236878	2310047I15Rik	RIKEN cDNA 2310047I15 gene	11		78887
Mm.236878	9530037G02Rik	RIKEN cDNA 9530037G02 gene	11		320044
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 131 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAC (24) 4.9 0.0049 P8 Cb GC CCCCACAAAA (6) 3.3 0.0033 P8 Cb GC CCTCAAAAAA (12) 3.3 0.0033 P8 Cb GC AATTTCCCCT (4) 1.6 0.0016 P8 Cb GC AATTTCTCCT (7) 1.6 0.0016 P8 Cb GC CACACAAAAA (7) 1.6 0.0016 P8 Cb GC CCAAAGAAAA (5) 1.6 0.0016 Cb medulloblastoma AATTTCCCCT (4) 13.9 0.0139 Cb medulloblastoma CCCCACAAAA (6) 6.9 0.0069 Cb medulloblastoma AAAAAAAAAC (24) 4.6 0.0046 Cb medulloblastoma AAAGGACTAA (3) 4.6 0.0046 Cb medulloblastoma AATTTCTCCT (7) 2.3 0.0023 Cb medulloblastoma CGGCAGGAGG (4) 2.3 0.0023 P8 GC+1d culture AATTTCTCCT (7) 5.7 0.0057 P8 GC+1d culture CTGGCCTTCA (5) 2.3 0.0023 P8 GC+1d culture AAAAAAAAAC (24) 1.1 0.0011 P8 GC+1d culture AATTTCCCCT (4) 1.1 0.0011 P8 GC+1d culture CACACAAAAA (7) 1.1 0.0011 P8 GC+1d culture CATTGCTCGT (3) 1.1 0.0011 P8 GC+1d culture CCCCACAAAA (6) 1.1 0.0011 P8 GC+SHH+1d culture AAAAAAAAAC (24) 3.5 0.0035 P8 GC+SHH+1d culture CCCCACAAAA (6) 3.5 0.0035 P8 GC+SHH+1d culture AATTTCTCCT (7) 2.3 0.0023 P8 GC+SHH+1d culture CCTCAAAAAA (12) 2.3 0.0023 P8 GC+SHH+1d culture CACACAAAAA (7) 1.2 0.0012 P8 GC+SHH+1d culture CATTGCTCGT (3) 1.2 0.0012 P8 GC+SHH+1d culture CCAAAGAAAA (5) 1.2 0.0012 3T3 fibroblasts CTGGCCTTCA (5) 17.5 0.0175 3T3 fibroblasts AATTTCCCCT (4) 3.5 0.0035 3T3 fibroblasts CTCCTGTGTG (4) 3.5 0.0035 E15 cortex AAAAAAAAAC (24) 4.9 0.0049 E15 cortex AATTTCTCCT (7) 4.9 0.0049 E15 cortex ACCTGGAGAT (4) 4.9 0.0049 E15 cortex CACACAAAAA (7) 4.9 0.0049 P1 cortex AATTTCCCCT (4) 27.3 0.0273 P1 cortex AAAAAAAAAC (24) 9.1 0.0091 P1 cortex AATTTCTCCT (7) 9.1 0.0091 P1 cortex CACACAAAAA (7) 4.5 0.0045 Hypothalamus CGGCAGGAGG (4) 7.2 0.0072 Hypothalamus AATTTCTCCT (7) 5.4 0.0054 Hypothalamus ACCTGGAGAT (4) 3.6 0.0036 Hypothalamus AAAAAAAAAC (24) 1.8 0.0018 Hypothalamus AAAGGACTAA (3) 1.8 0.0018 Hypothalamus AATTTCCCCT (4) 1.8 0.0018 Hypothalamus CCAGCGACAA (3) 1.8 0.0018 Hypothalamus CCCCACAAAA (6) 1.8 0.0018 Hypothalamus CTGGCCTTCA (5) 1.8 0.0018 E12.5 retina AATTTCCCCT (4) 7.5 0.0075 E12.5 retina CCTCAAAAAA (12) 5.6 0.0056 E12.5 retina CTGGCCTTCA (5) 3.8 0.0038 E12.5 retina CATTGCTCGT (3) 1.9 0.0019 E12.5 retina CCCCACAAAA (6) 1.9 0.0019 E14.5 retina AATTTCTCCT (7) 9.1 0.0091 E14.5 retina CCCCACAAAA (6) 3.6 0.0036 E14.5 retina CTGGCCTTCA (5) 3.6 0.0036 E14.5 retina AAAAAAAAAC (24) 1.8 0.0018 E14.5 retina AATTTCCCCT (4) 1.8 0.0018 E14.5 retina CCAGCGACAA (3) 1.8 0.0018 E14.5 retina CGGCAGGAGG (4) 1.8 0.0018 E16.5 retina AATTTCCCCT (4) 9.1 0.0091 E16.5 retina AATTTCTCCT (7) 9.1 0.0091 E16.5 retina CCCCACAAAA (6) 5.4 0.0054 E16.5 retina CTGGCCTTCA (5) 3.6 0.0036 E16.5 retina AAAAAAAAAC (24) 1.8 0.0018 E16.5 retina ACCTGGAGAT (4) 1.8 0.0018 E16.5 retina CCAGCGACAA (3) 1.8 0.0018 E16.5 retina CCTCAAAAAA (12) 1.8 0.0018 E16.5 retina CGGCAGGAGG (4) 1.8 0.0018 E18.5 retina AAAAAAAAAC (24) 3.6 0.0036 E18.5 retina CCCCACAAAA (6) 3.6 0.0036 E18.5 retina AATTTCCCCT (4) 1.8 0.0018 E18.5 retina AATTTCTCCT (7) 1.8 0.0018 E18.5 retina CTGGCCTTCA (5) 1.8 0.0018 P0.5 retina AATTTCCCCT (4) 3.9 0.0039 P0.5 retina AATTTCTCCT (7) 2 0.002 P0.5 retina ACCTGGAGAT (4) 2 0.002 P0.5 retina CCAGCGACAA (3) 2 0.002 P2.5 retina AATTTCCCCT (4) 12.3 0.0123 P2.5 retina CCCCACAAAA (6) 10.6 0.0106 P2.5 retina AAAAAAAAAC (24) 5.3 0.0053 P2.5 retina CCTCAAAAAA (12) 3.5 0.0035 P2.5 retina ACCTGGAGAT (4) 1.8 0.0018 P2.5 retina CACACAAAAA (7) 1.8 0.0018 P2.5 retina CATTGCTCGT (3) 1.8 0.0018 P2.5 retina CGGCAGGAGG (4) 1.8 0.0018 P4.5 retina AATTTCCCCT (4) 7.9 0.0079 P4.5 retina CTGGCCTTCA (5) 5.9 0.0059 P4.5 retina AAAAAAAAAC (24) 2 0.002 P4.5 retina AATTTCTCCT (7) 2 0.002 P4.5 retina ACCTGGAGAT (4) 2 0.002 P4.5 retina CACACAAAAA (7) 2 0.002 P4.5 retina CATTGCTCGT (3) 2 0.002 P4.5 retina CCAAAGAAAA (5) 2 0.002 P4.5 retina CCAGCGACAA (3) 2 0.002 P4.5 retina CCCCACAAAA (6) 2 0.002 P4.5 retina CCTCAAAAAA (12) 2 0.002 P6.5 retina ACCTGGAGAT (4) 10 0.01 P6.5 retina CATTGCTCGT (3) 10 0.01 P6.5 retina CCCCACAAAA (6) 8.3 0.0083 P6.5 retina AATTTCCCCT (4) 6.7 0.0067 P6.5 retina AAAAAAAAAC (24) 5 0.005 P6.5 retina AATTTCTCCT (7) 3.3 0.0033 P6.5 retina CTCCTGTGTG (4) 3.3 0.0033 P6.5 retina CTGGCCTTCA (5) 3.3 0.0033 P6.5 retina CCAGCGACAA (3) 1.7 0.0017 P6.5 retina CCTCAAAAAA (12) 1.7 0.0017 P10.5 crx- retina AATTTCCCCT (4) 65 0.065 P10.5 crx- retina AATTTCTCCT (7) 9.3 0.0093 P10.5 crx- retina CATTGCTCGT (3) 9.3 0.0093 P10.5 crx- retina AAAAAAAAAC (24) 1.9 0.0019 P10.5 crx- retina ACCTGGAGAT (4) 1.9 0.0019 P10.5 crx- retina CCCCACAAAA (6) 1.9 0.0019 P10.5 crx+ retina AATTTCCCCT (4) 13.5 0.0135 P10.5 crx+ retina CCCCACAAAA (6) 5.8 0.0058 P10.5 crx+ retina CTGGCCTTCA (5) 5.8 0.0058 P10.5 crx+ retina AATTTCTCCT (7) 1.9 0.0019 P10.5 crx+ retina ACCTGGAGAT (4) 1.9 0.0019 P10.5 crx+ retina CACACAAAAA (7) 1.9 0.0019 P10.5 crx+ retina CATTGCTCGT (3) 1.9 0.0019 P10.5 crx+ retina CCTCAAAAAA (12) 1.9 0.0019 P10.5 crx+ retina CGGCAGGAGG (4) 1.9 0.0019 Adult retinal CCCCACAAAA (6) 9.3 0.0093 Adult retinal CATTGCTCGT (3) 3.7 0.0037 Adult retinal AATTTCTCCT (7) 1.9 0.0019 Adult retinal CACACAAAAA (7) 1.9 0.0019 ONL CATTGCTCGT (3) 5.7 0.0057 ONL CCCCACAAAA (6) 5.7 0.0057 ONL AATTTCCCCT (4) 3.8 0.0038 ONL AATTTCTCCT (7) 1.9 0.0019 ONL CACACAAAAA (7) 1.9 0.0019 ONL CCTCAAAAAA (12) 1.9 0.0019