Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.239247
Asph
aspartate-beta-hydroxylase
4
65973
Mm.239247
C79816
expressed sequence C79816
7
97379
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 120 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CCTTTAATCC (
355
)
52.2
0.0522
P8 Cb GC
AACACTGGAT
(
3
)
3.3
0.0033
P8 Cb GC
AAGACCCAAA (
10
)
1.6
0.0016
P8 Cb GC
TGTTCTCATT (
8
)
1.6
0.0016
P8 Cb GC
TTCCAAATAA
(
3
)
1.6
0.0016
Cb medulloblastoma
CCTTTAATCC (
355
)
41.6
0.0416
Cb medulloblastoma
AACACTGGAT
(
3
)
9.2
0.0092
Cb medulloblastoma
CTATGCAACA
(
2
)
9.2
0.0092
Cb medulloblastoma
GAACAAATTT (
5
)
4.6
0.0046
Cb medulloblastoma
TATTTTAAAA (
10
)
4.6
0.0046
Cb medulloblastoma
AGGGGAAATA
(
4
)
2.3
0.0023
Cb medulloblastoma
TTCTTTAAAA (
7
)
2.3
0.0023
Cb medulloblastoma
TTTTTTAAAA
(
15
)
2.3
0.0023
P8 GC+1d culture
CCTTTAATCC (
355
)
32
0.032
P8 GC+1d culture
AACACTGGAT
(
3
)
3.4
0.0034
P8 GC+1d culture
TTATATTTAC
(
2
)
3.4
0.0034
P8 GC+1d culture
TTTCCTGAGA
(
3
)
3.4
0.0034
P8 GC+1d culture
CCCAGAGGAG (
3
)
2.3
0.0023
P8 GC+1d culture
CTATGCAACA
(
2
)
2.3
0.0023
P8 GC+1d culture
TGTTCTCATT (
8
)
2.3
0.0023
P8 GC+1d culture
GAACAAATTT (
5
)
1.1
0.0011
P8 GC+1d culture
TTCTTTAAAA (
7
)
1.1
0.0011
P8 GC+SHH+1d culture
CCTTTAATCC (
355
)
25.8
0.0258
P8 GC+SHH+1d culture
AACACTGGAT
(
3
)
9.4
0.0094
P8 GC+SHH+1d culture
TTTTTTAAAA
(
15
)
3.5
0.0035
P8 GC+SHH+1d culture
ACCTTGAAAC (
6
)
2.3
0.0023
P8 GC+SHH+1d culture
TTATATTTAC
(
2
)
2.3
0.0023
P8 GC+SHH+1d culture
TTCCAAATAA
(
3
)
2.3
0.0023
P8 GC+SHH+1d culture
AAGACCCAAA (
10
)
1.2
0.0012
P8 GC+SHH+1d culture
CTATGCAACA
(
2
)
1.2
0.0012
P8 GC+SHH+1d culture
TATTTTAAAA (
10
)
1.2
0.0012
P8 GC+SHH+1d culture
TGTTCTCATT (
8
)
1.2
0.0012
P8 GC+SHH+1d culture
TTTCCTGAGA
(
3
)
1.2
0.0012
3T3 fibroblasts
CCTTTAATCC (
355
)
70.1
0.0701
3T3 fibroblasts
ACCTTGAAAC (
6
)
3.5
0.0035
E15 cortex
CCTTTAATCC (
355
)
54.4
0.0544
E15 cortex
CCCAGAGGAG (
3
)
9.9
0.0099
P1 cortex
CCTTTAATCC (
355
)
154.5
0.1545
P1 cortex
AACACTGGAT
(
3
)
4.5
0.0045
P1 cortex
CTATGCAACA
(
2
)
4.5
0.0045
P1 cortex
TATTTTAAAA (
10
)
4.5
0.0045
Hypothalamus
CCTTTAATCC (
355
)
19.9
0.0199
Hypothalamus
AACACTGGAT
(
3
)
5.4
0.0054
Hypothalamus
ACCTTGAAAC (
6
)
3.6
0.0036
Hypothalamus
CTATGCAACA
(
2
)
3.6
0.0036
Hypothalamus
GAACAAATTT (
5
)
1.8
0.0018
Hypothalamus
GGCCAGGGCT
(
6
)
1.8
0.0018
Hypothalamus
TATTTTAAAA (
10
)
1.8
0.0018
Hypothalamus
TGTTCTCATT (
8
)
1.8
0.0018
E12.5 retina
CCTTTAATCC (
355
)
75.1
0.0751
E12.5 retina
CCCAGAGGAG (
3
)
9.4
0.0094
E12.5 retina
TGTTCTCATT (
8
)
5.6
0.0056
E12.5 retina
ACCTTGAAAC (
6
)
3.8
0.0038
E12.5 retina
CTATGCAACA
(
2
)
1.9
0.0019
E14.5 retina
CCTTTAATCC (
355
)
120.3
0.1203
E14.5 retina
CCCAGAGGAG (
3
)
3.6
0.0036
E14.5 retina
AACACTGGAT
(
3
)
1.8
0.0018
E14.5 retina
ACCTTGAAAC (
6
)
1.8
0.0018
E14.5 retina
TATTTTAAAA (
10
)
1.8
0.0018
E14.5 retina
TTCCAAATAA
(
3
)
1.8
0.0018
E16.5 retina
CCTTTAATCC (
355
)
68.8
0.0688
E16.5 retina
ACCTTGAAAC (
6
)
10.9
0.0109
E16.5 retina
TGTTCTCATT (
8
)
5.4
0.0054
E16.5 retina
TATTTTAAAA (
10
)
3.6
0.0036
E16.5 retina
AAGACCCAAA (
10
)
1.8
0.0018
E16.5 retina
CCCAGAGGAG (
3
)
1.8
0.0018
E16.5 retina
TGGGAGAACC (
2
)
1.8
0.0018
E16.5 retina
TGGGAGACAC
(
2
)
1.8
0.0018
E18.5 retina
CCTTTAATCC (
355
)
23.6
0.0236
E18.5 retina
TTTTTTAAAA
(
15
)
5.5
0.0055
E18.5 retina
CCCAGAGGAG (
3
)
3.6
0.0036
E18.5 retina
TTCTTTAAAA (
7
)
3.6
0.0036
E18.5 retina
AACACTGGAT
(
3
)
1.8
0.0018
E18.5 retina
ACCTTGAAAC (
6
)
1.8
0.0018
E18.5 retina
CTATGCAACA
(
2
)
1.8
0.0018
E18.5 retina
TGGGAGACAC
(
2
)
1.8
0.0018
P0.5 retina
CCTTTAATCC (
355
)
72.6
0.0726
P0.5 retina
CCCAGAGGAG (
3
)
5.9
0.0059
P0.5 retina
CTATGCAACA
(
2
)
3.9
0.0039
P0.5 retina
TGGGAGACAC
(
2
)
3.9
0.0039
P0.5 retina
ACCTTGAAAC (
6
)
2
0.002
P0.5 retina
TGTTCTCATT (
8
)
2
0.002
P2.5 retina
CCTTTAATCC (
355
)
70.4
0.0704
P2.5 retina
TGTTCTCATT (
8
)
8.8
0.0088
P2.5 retina
CCCAGAGGAG (
3
)
7
0.007
P2.5 retina
CTATGCAACA
(
2
)
7
0.007
P2.5 retina
TGGGAGAACC (
2
)
3.5
0.0035
P2.5 retina
AACACTGGAT
(
3
)
1.8
0.0018
P2.5 retina
TGGGAGACAC
(
2
)
1.8
0.0018
P2.5 retina
TTCCAAATAA
(
3
)
1.8
0.0018
P2.5 retina
TTCTTTAAAA (
7
)
1.8
0.0018
P2.5 retina
TTTTTTAAAA
(
15
)
1.8
0.0018
P4.5 retina
CCTTTAATCC (
355
)
43.6
0.0436
P4.5 retina
AACACTGGAT
(
3
)
4
0.004
P4.5 retina
CCCAGAGGAG (
3
)
4
0.004
P4.5 retina
CTATGCAACA
(
2
)
4
0.004
P4.5 retina
TGTTCTCATT (
8
)
4
0.004
P4.5 retina
TTCTTTAAAA (
7
)
4
0.004
P4.5 retina
TATTTTAAAA (
10
)
2
0.002
P6.5 retina
CCTTTAATCC (
355
)
70
0.07
P6.5 retina
AACACTGGAT
(
3
)
5
0.005
P6.5 retina
CTATGCAACA
(
2
)
3.3
0.0033
P6.5 retina
TATTTTAAAA (
10
)
3.3
0.0033
P6.5 retina
CCCAGAGGAG (
3
)
1.7
0.0017
P6.5 retina
GGCCAGGGCT
(
6
)
1.7
0.0017
P6.5 retina
TTATATTTAC
(
2
)
1.7
0.0017
P10.5 crx- retina
CCTTTAATCC (
355
)
63.2
0.0632
P10.5 crx- retina
TTATATTTAC
(
2
)
1.9
0.0019
P10.5 crx+ retina
CCTTTAATCC (
355
)
38.4
0.0384
P10.5 crx+ retina
CTATGCAACA
(
2
)
5.8
0.0058
P10.5 crx+ retina
AACACTGGAT
(
3
)
1.9
0.0019
Adult retinal
CCTTTAATCC (
355
)
129.6
0.1296
Adult retinal
CCCAGAGGAG (
3
)
1.9
0.0019
Adult retinal
CTATGCAACA
(
2
)
1.9
0.0019
Adult retinal
GGCCAGGGCT
(
6
)
1.9
0.0019
Adult retinal
TGGGAGACAC
(
2
)
1.9
0.0019
ONL
CCTTTAATCC (
355
)
84.3
0.0843
ONL
AGGGGAAATA
(
4
)
3.8
0.0038
ONL
CTATGCAACA
(
2
)
1.9
0.0019
ONL
TTCTTTAAAA (
7
)
1.9
0.0019
