Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.239329	Arhgef2	rho/rac guanine nucleotide exchange factor (GEF) 2	3		16800
Gene Ontology	cell growth and/or maintenance | diacylglycerol binding | guanyl-nucleotide exchange factor activity | intracellular signaling cascade
Human Homolog	ARHGEF2[rho/rac guanine nucleotide exchange factor (GEF) 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 140 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAA (658) 203.9 0.2039 P8 Cb GC TGGTTGCTGG (369) 68.5 0.0685 P8 Cb GC GCAGGGTGGG (6) 37.5 0.0375 P8 Cb GC AATGGATGCA (5) 13.1 0.0131 P8 Cb GC GAGTTCAGGA (5) 3.3 0.0033 P8 Cb GC CGCTTTAGGT 1.6 0.0016 P8 Cb GC GGGACTTGGG (10) 1.6 0.0016 Cb medulloblastoma AAAAAAAAAA (658) 797.8 0.7978 Cb medulloblastoma TGGTTGCTGG (369) 113.3 0.1133 Cb medulloblastoma GCAGGGTGGG (6) 23.1 0.0231 Cb medulloblastoma CAGCCAGGCA (2) 4.6 0.0046 Cb medulloblastoma CTGCCCCCTC 2.3 0.0023 Cb medulloblastoma GGGACTTGGG (10) 2.3 0.0023 P8 GC+1d culture AAAAAAAAAA (658) 204.3 0.2043 P8 GC+1d culture TGGTTGCTGG (369) 57.1 0.0571 P8 GC+1d culture GCAGGGTGGG (6) 45.7 0.0457 P8 GC+1d culture AATGGATGCA (5) 20.5 0.0205 P8 GC+1d culture GGGACTTGGG (10) 4.6 0.0046 P8 GC+1d culture GAAATCTGGC (2) 3.4 0.0034 P8 GC+1d culture AAGGCTGCCT (4) 2.3 0.0023 P8 GC+1d culture CGCTTTAGGT 2.3 0.0023 P8 GC+1d culture AAGTCTCCCT (3) 1.1 0.0011 P8 GC+1d culture ACCGCCTGGA (2) 1.1 0.0011 P8 GC+1d culture CTGCCCCCTC 1.1 0.0011 P8 GC+SHH+1d culture AAAAAAAAAA (658) 278.7 0.2787 P8 GC+SHH+1d culture TGGTTGCTGG (369) 89 0.089 P8 GC+SHH+1d culture GCAGGGTGGG (6) 52.7 0.0527 P8 GC+SHH+1d culture AATGGATGCA (5) 19.9 0.0199 P8 GC+SHH+1d culture ACCGCCTGGA (2) 2.3 0.0023 P8 GC+SHH+1d culture CGCTTTAGGT 2.3 0.0023 P8 GC+SHH+1d culture CTGCCCCCTC 2.3 0.0023 P8 GC+SHH+1d culture CCCAGGTCTA 1.2 0.0012 P8 GC+SHH+1d culture GAAATCTGGC (2) 1.2 0.0012 3T3 fibroblasts TGGTTGCTGG (369) 220.8 0.2208 3T3 fibroblasts AAAAAAAAAA (658) 28 0.028 3T3 fibroblasts GCAGGGTGGG (6) 10.5 0.0105 3T3 fibroblasts CGCTTTAGGT 3.5 0.0035 3T3 fibroblasts GAAATCTGGC (2) 3.5 0.0035 3T3 fibroblasts GGGACTTGGG (10) 3.5 0.0035 E15 cortex TGGTTGCTGG (369) 277.1 0.2771 E15 cortex AAAAAAAAAA (658) 212.8 0.2128 E15 cortex GCAGGGTGGG (6) 34.6 0.0346 E15 cortex AATGGATGCA (5) 14.8 0.0148 E15 cortex AAGTCTCCCT (3) 9.9 0.0099 E15 cortex GAAATCTGGC (2) 9.9 0.0099 E15 cortex CTGCCCCCTC 4.9 0.0049 E15 cortex GGGACTTGGG (10) 4.9 0.0049 P1 cortex AAAAAAAAAA (658) 245.4 0.2454 P1 cortex TGGTTGCTGG (369) 86.4 0.0864 P1 cortex GCAGGGTGGG (6) 22.7 0.0227 P1 cortex AATGGATGCA (5) 13.6 0.0136 P1 cortex CGCTTTAGGT 4.5 0.0045 P1 cortex GAAATCTGGC (2) 4.5 0.0045 Hypothalamus TGGTTGCTGG (369) 349.6 0.3496 Hypothalamus AAAAAAAAAA (658) 123.2 0.1232 Hypothalamus AATGGATGCA (5) 9.1 0.0091 Hypothalamus GCAGGGTGGG (6) 7.2 0.0072 Hypothalamus CAGCCAGGCA (2) 3.6 0.0036 Hypothalamus AAGGCTGCCT (4) 1.8 0.0018 Hypothalamus CAGTCAAAAA (4) 1.8 0.0018 Hypothalamus GGGACTTGGG (10) 1.8 0.0018 E12.5 retina TGGTTGCTGG (369) 157.7 0.1577 E12.5 retina AAAAAAAAAA (658) 138.9 0.1389 E12.5 retina GCAGGGTGGG (6) 37.5 0.0375 E12.5 retina AATGGATGCA (5) 18.8 0.0188 E12.5 retina CAGTCAAAAA (4) 1.9 0.0019 E12.5 retina CGCTTTAGGT 1.9 0.0019 E12.5 retina GGGACTTGGG (10) 1.9 0.0019 E14.5 retina TGGTTGCTGG (369) 936.5 0.9365 E14.5 retina AAAAAAAAAA (658) 94.7 0.0947 E14.5 retina GCAGGGTGGG (6) 43.7 0.0437 E14.5 retina AATGGATGCA (5) 5.5 0.0055 E14.5 retina AAGGCTGCCT (4) 1.8 0.0018 E14.5 retina CAGTCAAAAA (4) 1.8 0.0018 E14.5 retina GGAACCAAGC (3) 1.8 0.0018 E16.5 retina TGGTTGCTGG (369) 767.9 0.7679 E16.5 retina AAAAAAAAAA (658) 43.5 0.0435 E16.5 retina GCAGGGTGGG (6) 32.6 0.0326 E16.5 retina AATGGATGCA (5) 10.9 0.0109 E16.5 retina CGCTTTAGGT 5.4 0.0054 E16.5 retina GGGACTTGGG (10) 1.8 0.0018 E18.5 retina AAAAAAAAAA (658) 374.7 0.3747 E18.5 retina TGGTTGCTGG (369) 252.8 0.2528 E18.5 retina GCAGGGTGGG (6) 49.1 0.0491 E18.5 retina AATGGATGCA (5) 7.3 0.0073 E18.5 retina GGGACTTGGG (10) 3.6 0.0036 E18.5 retina ACCGCCTGGA (2) 1.8 0.0018 P0.5 retina TGGTTGCTGG (369) 190.4 0.1904 P0.5 retina AAAAAAAAAA (658) 117.8 0.1178 P0.5 retina GCAGGGTGGG (6) 47.1 0.0471 P0.5 retina AATGGATGCA (5) 13.7 0.0137 P0.5 retina AAGGCTGCCT (4) 3.9 0.0039 P0.5 retina GGAACCAAGC (3) 3.9 0.0039 P0.5 retina GGGACTTGGG (10) 3.9 0.0039 P0.5 retina GAAATCTGGC (2) 2 0.002 P2.5 retina AAAAAAAAAA (658) 329.1 0.3291 P2.5 retina TGGTTGCTGG (369) 165.4 0.1654 P2.5 retina GCAGGGTGGG (6) 88 0.088 P2.5 retina AATGGATGCA (5) 10.6 0.0106 P2.5 retina GGGACTTGGG (10) 5.3 0.0053 P2.5 retina CGCTTTAGGT 3.5 0.0035 P2.5 retina AAGGCTGCCT (4) 1.8 0.0018 P4.5 retina AAAAAAAAAA (658) 283.3 0.2833 P4.5 retina TGGTTGCTGG (369) 150.6 0.1506 P4.5 retina GCAGGGTGGG (6) 71.3 0.0713 P4.5 retina AATGGATGCA (5) 15.9 0.0159 P4.5 retina CCCAGGTCTA 2 0.002 P4.5 retina CGCTTTAGGT 2 0.002 P4.5 retina GGGACTTGGG (10) 2 0.002 P6.5 retina AAAAAAAAAA (658) 266.8 0.2668 P6.5 retina TGGTTGCTGG (369) 156.7 0.1567 P6.5 retina GCAGGGTGGG (6) 41.7 0.0417 P6.5 retina AATGGATGCA (5) 13.3 0.0133 P6.5 retina GGGACTTGGG (10) 5 0.005 P6.5 retina CTGCCCCCTC 1.7 0.0017 P10.5 crx- retina TGGTTGCTGG (369) 280.5 0.2805 P10.5 crx- retina AAAAAAAAAA (658) 44.6 0.0446 P10.5 crx- retina AATGGATGCA (5) 5.6 0.0056 P10.5 crx- retina GCAGGGTGGG (6) 3.7 0.0037 P10.5 crx+ retina TGGTTGCTGG (369) 101.9 0.1019 P10.5 crx+ retina AAAAAAAAAA (658) 96.1 0.0961 P10.5 crx+ retina GCAGGGTGGG (6) 38.4 0.0384 P10.5 crx+ retina AATGGATGCA (5) 13.5 0.0135 P10.5 crx+ retina GGGACTTGGG (10) 9.6 0.0096 P10.5 crx+ retina CCCAGGTCTA 1.9 0.0019 Adult retinal TGGTTGCTGG (369) 214.8 0.2148 Adult retinal AAAAAAAAAA (658) 57.4 0.0574 Adult retinal AATGGATGCA (5) 7.4 0.0074 Adult retinal GCAGGGTGGG (6) 7.4 0.0074 Adult retinal GGGACTTGGG (10) 7.4 0.0074 Adult retinal GAAATCTGGC (2) 1.9 0.0019 ONL TGGTTGCTGG (369) 398.4 0.3984 ONL AAAAAAAAAA (658) 103.4 0.1034 ONL AATGGATGCA (5) 5.7 0.0057 ONL CAGTCAAAAA (4) 3.8 0.0038 ONL AAGGCTGCCT (4) 1.9 0.0019 ONL CGCTTTAGGT 1.9 0.0019 ONL GAAATCTGGC (2) 1.9 0.0019 ONL GAGTTCAGGA (5) 1.9 0.0019 ONL GCAGGGTGGG (6) 1.9 0.0019