Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.240839	D3Ertd34e	DNA segment, Chr 3, ERATO Doi 34, expressed	3	3 49.0 cM	52061
Mm.240839	Tpm3	tropomyosin 3, gamma	3		59069
Gene Ontology	actin binding | cytoskeleton | muscle development | muscle thin filament tropomyosin | regulation of muscle contraction
Human Homolog	TPM3[tropomyosin 3]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 115 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTCAGGTGGT (4) 13.1 0.0131 P8 Cb GC AACATCATCT (7) 6.5 0.0065 P8 Cb GC TATTTTTCTA (13) 4.9 0.0049 P8 Cb GC AGGCCCTGGG (6) 1.6 0.0016 P8 Cb GC CCGCCCCTTA (2) 1.6 0.0016 P8 Cb GC GAGGAGAAAC (3) 1.6 0.0016 P8 Cb GC GTCTTTGTGA (5) 1.6 0.0016 P8 Cb GC TCTATCCAGA (2) 1.6 0.0016 Cb medulloblastoma TTCAGGTGGT (4) 6.9 0.0069 Cb medulloblastoma GATATTTTCT (4) 4.6 0.0046 Cb medulloblastoma AGGCCCTGGG (6) 2.3 0.0023 Cb medulloblastoma GAGGAGAAAA (5) 2.3 0.0023 Cb medulloblastoma GAGGAGAAAC (3) 2.3 0.0023 Cb medulloblastoma GTCTTTGTGA (5) 2.3 0.0023 Cb medulloblastoma TATTTTTCTA (13) 2.3 0.0023 P8 GC+1d culture TTCAGGTGGT (4) 13.7 0.0137 P8 GC+1d culture AACATCATCT (7) 6.8 0.0068 P8 GC+1d culture TATTTTTCTA (13) 3.4 0.0034 P8 GC+1d culture GAGGAGAAAA (5) 1.1 0.0011 P8 GC+1d culture GAGGAGAAAC (3) 1.1 0.0011 P8 GC+1d culture GATATTTTCT (4) 1.1 0.0011 P8 GC+1d culture GCAATTGGGT (4) 1.1 0.0011 P8 GC+1d culture GCCGGGACCA (3) 1.1 0.0011 P8 GC+1d culture GTCTTTGTGA (5) 1.1 0.0011 P8 GC+SHH+1d culture TTCAGGTGGT (4) 14.1 0.0141 P8 GC+SHH+1d culture TATTTTTCTA (13) 10.5 0.0105 P8 GC+SHH+1d culture AACATCATCT (7) 7 0.007 P8 GC+SHH+1d culture GAGGAGAAAA (5) 4.7 0.0047 P8 GC+SHH+1d culture GGCGGGACCA (4) 2.3 0.0023 P8 GC+SHH+1d culture AGGCCCTGGG (6) 1.2 0.0012 P8 GC+SHH+1d culture GCCGGGACCA (3) 1.2 0.0012 P8 GC+SHH+1d culture TCTATCCAGA (2) 1.2 0.0012 3T3 fibroblasts TTCAGGTGGT (4) 14 0.014 3T3 fibroblasts GTCTTTGTGA (5) 7 0.007 3T3 fibroblasts CCGCCCCTTA (2) 3.5 0.0035 3T3 fibroblasts GAGGAGAAAC (3) 3.5 0.0035 3T3 fibroblasts GCCGGGACCA (3) 3.5 0.0035 E15 cortex TTCAGGTGGT (4) 24.7 0.0247 E15 cortex AACATCATCT (7) 4.9 0.0049 E15 cortex GCAATTGGGT (4) 4.9 0.0049 E15 cortex GCCGGGACCA (3) 4.9 0.0049 E15 cortex TGGCTAAATC (2) 4.9 0.0049 P1 cortex AACATCATCT (7) 9.1 0.0091 P1 cortex TATTTTTCTA (13) 9.1 0.0091 P1 cortex TCTGAAGAGG (6) 9.1 0.0091 P1 cortex TTCAGGTGGT (4) 9.1 0.0091 P1 cortex AGGCCCTGGG (6) 4.5 0.0045 Hypothalamus AACATCATCT (7) 5.4 0.0054 Hypothalamus GAGGAGAAAC (3) 3.6 0.0036 Hypothalamus GATATTTTCT (4) 1.8 0.0018 Hypothalamus GCCGGGACCA (3) 1.8 0.0018 Hypothalamus TTCAGGTGGT (4) 1.8 0.0018 E12.5 retina TATTTTTCTA (13) 15 0.015 E12.5 retina TTCAGGTGGT (4) 15 0.015 E12.5 retina AGGCCCTGGG (6) 3.8 0.0038 E12.5 retina TCTATCCAGA (2) 1.9 0.0019 E14.5 retina TTCAGGTGGT (4) 20 0.02 E14.5 retina TATTTTTCTA (13) 16.4 0.0164 E14.5 retina AGGCCCTGGG (6) 7.3 0.0073 E14.5 retina AACATCATCT (7) 5.5 0.0055 E14.5 retina CCGCCCCTTA (2) 1.8 0.0018 E14.5 retina GCAATTGGGT (4) 1.8 0.0018 E14.5 retina GCCGGGACCA (3) 1.8 0.0018 E16.5 retina TTCAGGTGGT (4) 14.5 0.0145 E16.5 retina AACATCATCT (7) 9.1 0.0091 E16.5 retina AGGCCCTGGG (6) 3.6 0.0036 E16.5 retina GCAATTGGGT (4) 3.6 0.0036 E16.5 retina GATATTTTCT (4) 1.8 0.0018 E16.5 retina TATTTTTCTA (13) 1.8 0.0018 E16.5 retina TGGCTAAATC (2) 1.8 0.0018 E18.5 retina TATTTTTCTA (13) 5.5 0.0055 E18.5 retina TTCAGGTGGT (4) 5.5 0.0055 E18.5 retina AGGCCCTGGG (6) 1.8 0.0018 E18.5 retina GAGGAGAAAC (3) 1.8 0.0018 E18.5 retina GCAATTGGGT (4) 1.8 0.0018 E18.5 retina TGGCTAAATC (2) 1.8 0.0018 P0.5 retina TTCAGGTGGT (4) 11.8 0.0118 P0.5 retina TATTTTTCTA (13) 7.9 0.0079 P0.5 retina AACATCATCT (7) 2 0.002 P0.5 retina AGGCCCTGGG (6) 2 0.002 P0.5 retina GAGGAGAAAC (3) 2 0.002 P0.5 retina GCAATTGGGT (4) 2 0.002 P2.5 retina TATTTTTCTA (13) 7 0.007 P2.5 retina TTCAGGTGGT (4) 7 0.007 P2.5 retina AGGCCCTGGG (6) 3.5 0.0035 P2.5 retina TCTATCCAGA (2) 3.5 0.0035 P2.5 retina GAGGAGAAAA (5) 1.8 0.0018 P2.5 retina GCAATTGGGT (4) 1.8 0.0018 P2.5 retina GTTCCAGGTG (2) 1.8 0.0018 P4.5 retina TTCAGGTGGT (4) 15.9 0.0159 P4.5 retina TATTTTTCTA (13) 7.9 0.0079 P4.5 retina AGGCCCTGGG (6) 4 0.004 P4.5 retina GTTCCAGGTG (2) 4 0.004 P4.5 retina AACATCATCT (7) 2 0.002 P4.5 retina GCAATTGGGT (4) 2 0.002 P4.5 retina TCTGAAGAGG (6) 2 0.002 P6.5 retina TTCAGGTGGT (4) 13.3 0.0133 P6.5 retina TATTTTTCTA (13) 11.7 0.0117 P6.5 retina AACATCATCT (7) 5 0.005 P6.5 retina GATATTTTCT (4) 3.3 0.0033 P6.5 retina AGGCCCTGGG (6) 1.7 0.0017 P6.5 retina GCAATTGGGT (4) 1.7 0.0017 P6.5 retina TCTATCCAGA (2) 1.7 0.0017 P6.5 retina TCTGAAGAGG (6) 1.7 0.0017 P10.5 crx- retina TTCAGGTGGT (4) 9.3 0.0093 P10.5 crx- retina AACATCATCT (7) 3.7 0.0037 P10.5 crx- retina CCGCCCCTTA (2) 1.9 0.0019 P10.5 crx- retina GATATTTTCT (4) 1.9 0.0019 P10.5 crx- retina TATTTTTCTA (13) 1.9 0.0019 Adult retinal TATTTTTCTA (13) 5.6 0.0056 Adult retinal TTCAGGTGGT (4) 3.7 0.0037 ONL GCAATTGGGT (4) 1.9 0.0019 ONL TATTTTTCTA (13) 1.9 0.0019 ONL TCTATCCAGA (2) 1.9 0.0019 ONL TTCAGGTGGT (4) 1.9 0.0019