Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.241931	Ppp1cb	protein phosphatase 1, catalytic subunit, beta isoform	5		19046
Gene Ontology	CTD phosphatase activity | cytokinesis | glycogen metabolism | hydrolase activity | manganese ion binding | myosin phosphatase activity | phosphoprotein phosphatase activity | protein amino acid dephosphorylation | protein binding | protein phosphatase type 1 activity | protein phosphatase type 1 activity | protein phosphatase type 2A activity | protein phosphatase type 2C activity | protein serine/threonine phosphatase activity | protein serine/threonine phosphatase complex
Human Homolog	PPP1CB[protein phosphatase 1, catalytic subunit, beta isoform]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 101 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTTTGTAGTG (2) 16.3 0.0163 P8 Cb GC TGTGTGCCTG (6) 3.3 0.0033 P8 Cb GC TTTGTAAGTT (2) 3.3 0.0033 P8 Cb GC CCAAAAGGTG (3) 1.6 0.0016 P8 Cb GC CTTAACTTTC 1.6 0.0016 P8 Cb GC GAAAGGAAAA (6) 1.6 0.0016 P8 Cb GC GGGTTAAAGG (2) 1.6 0.0016 Cb medulloblastoma CTTTGTAGTG (2) 6.9 0.0069 Cb medulloblastoma GAATTAGAAA (5) 2.3 0.0023 Cb medulloblastoma GTAAAAAAAT (4) 2.3 0.0023 Cb medulloblastoma GTGGGTACAT (2) 2.3 0.0023 Cb medulloblastoma TCACAGAGTC (3) 2.3 0.0023 P8 GC+1d culture TTTGTAAGTT (2) 5.7 0.0057 P8 GC+1d culture CTTTGTAGTG (2) 3.4 0.0034 P8 GC+1d culture TGCATCTTTT (6) 1.1 0.0011 P8 GC+SHH+1d culture CTTTGTAGTG (2) 5.9 0.0059 P8 GC+SHH+1d culture TTTGTAAGTT (2) 2.3 0.0023 P8 GC+SHH+1d culture AAGATCCATC 1.2 0.0012 P8 GC+SHH+1d culture CCAAAAGGTG (3) 1.2 0.0012 P8 GC+SHH+1d culture GTGGGTACAT (2) 1.2 0.0012 3T3 fibroblasts GTGGGTACAT (2) 3.5 0.0035 3T3 fibroblasts TGTGTGCCTG (6) 3.5 0.0035 E15 cortex TGCATCTTTT (6) 4.9 0.0049 P1 cortex CTTTGTTAGT (2) 9.1 0.0091 P1 cortex AGAATCCTTT 4.5 0.0045 P1 cortex CCAAAAGGTG (3) 4.5 0.0045 P1 cortex TTTGTAAGTT (2) 4.5 0.0045 Hypothalamus CTTTGTAGTG (2) 3.6 0.0036 Hypothalamus GGGTTAAAGG (2) 1.8 0.0018 Hypothalamus GTGGGTACAT (2) 1.8 0.0018 Hypothalamus TCACAGAGTC (3) 1.8 0.0018 E12.5 retina CTTTGTAGTG (2) 3.8 0.0038 E12.5 retina AAGATCCATC 1.9 0.0019 E12.5 retina CTTTGTTAGT (2) 1.9 0.0019 E14.5 retina AGAATCCTTT 3.6 0.0036 E14.5 retina CTTTGTTAGT (2) 3.6 0.0036 E14.5 retina GAAAGGAAAA (6) 1.8 0.0018 E14.5 retina TGCATCTTTT (6) 1.8 0.0018 E14.5 retina TTTGTAAGTT (2) 1.8 0.0018 E16.5 retina TCACAGAGTC (3) 3.6 0.0036 E16.5 retina CTTTGTTAGT (2) 1.8 0.0018 E16.5 retina GAATTAGAAA (5) 1.8 0.0018 E16.5 retina GTGGGTACAT (2) 1.8 0.0018 E16.5 retina TTTGTAAGTT (2) 1.8 0.0018 E18.5 retina GAAAGGAAAA (6) 3.6 0.0036 E18.5 retina CTTTGTAGTG (2) 1.8 0.0018 E18.5 retina CTTTGTTAGT (2) 1.8 0.0018 E18.5 retina GAGAGAATGC (7) 1.8 0.0018 E18.5 retina GTGGTGGAGA 1.8 0.0018 E18.5 retina TCACAGAGTC (3) 1.8 0.0018 P0.5 retina CTTTGTTAGT (2) 3.9 0.0039 P0.5 retina AAAAGGGGAT (5) 2 0.002 P0.5 retina AAGATCCATC 2 0.002 P0.5 retina CCAAAAGGTG (3) 2 0.002 P0.5 retina CTTTGTAGTG (2) 2 0.002 P0.5 retina GAATTAGAAA (5) 2 0.002 P0.5 retina TCTTCCTCTC (3) 2 0.002 P0.5 retina TGTGTGCCTG (6) 2 0.002 P2.5 retina TTTGTAAGTT (2) 7 0.007 P2.5 retina CTTTGTAGTG (2) 5.3 0.0053 P2.5 retina AAGATCCATC 1.8 0.0018 P2.5 retina CTTTGTTAGT (2) 1.8 0.0018 P2.5 retina GTAAAAAAAT (4) 1.8 0.0018 P2.5 retina TCACAGAGTC (3) 1.8 0.0018 P4.5 retina CTTTGTTAGT (2) 5.9 0.0059 P4.5 retina GAGAGAATGC (7) 2 0.002 P4.5 retina TCACAGAGTC (3) 2 0.002 P4.5 retina TCTTCCTCTC (3) 2 0.002 P4.5 retina TTTGTAAGTT (2) 2 0.002 P6.5 retina CTTTGTTAGT (2) 3.3 0.0033 P6.5 retina TCTTCCTCTC (3) 3.3 0.0033 P6.5 retina TGTGTGCCTG (6) 3.3 0.0033 P6.5 retina TTTGTAAGTT (2) 3.3 0.0033 P6.5 retina TCACAGAGTC (3) 1.7 0.0017 P10.5 crx- retina CTTTGTTAGT (2) 7.4 0.0074 P10.5 crx- retina CTTTGTAGTG (2) 5.6 0.0056 P10.5 crx- retina TTTGTAAGTT (2) 3.7 0.0037 P10.5 crx- retina AGAATCCTTT 1.9 0.0019 P10.5 crx- retina CTTAACTTTC 1.9 0.0019 P10.5 crx- retina TCTTCCTCTC (3) 1.9 0.0019 P10.5 crx- retina TGTGTGCCTG (6) 1.9 0.0019 P10.5 crx+ retina CTTTGTAGTG (2) 17.3 0.0173 P10.5 crx+ retina CTTTGTTAGT (2) 3.8 0.0038 P10.5 crx+ retina AAAAGGGGAT (5) 1.9 0.0019 P10.5 crx+ retina GTAAAAAAAT (4) 1.9 0.0019 P10.5 crx+ retina TGTGTGCCTG (6) 1.9 0.0019 P10.5 crx+ retina TTTGTAAGTT (2) 1.9 0.0019 Adult retinal CTTTGTTAGT (2) 5.6 0.0056 Adult retinal TGTGTGCCTG (6) 3.7 0.0037 Adult retinal CTTTGTAGTG (2) 1.9 0.0019 Adult retinal GAAAGGAAAA (6) 1.9 0.0019 Adult retinal TCACAGAGTC (3) 1.9 0.0019 Adult retinal TCTTCCTCTC (3) 1.9 0.0019 ONL CTTTGTAGTG (2) 7.7 0.0077 ONL CTTTGTTAGT (2) 7.7 0.0077 ONL TCTTCCTCTC (3) 7.7 0.0077 ONL GTGGTGGAGA 3.8 0.0038 ONL AAAAGGGGAT (5) 1.9 0.0019 ONL CTTAACTTTC 1.9 0.0019 ONL GAGAGAATGC (7) 1.9 0.0019 ONL TTTGTAAGTT (2) 1.9 0.0019