Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.246108	A230048O21Rik	RIKEN cDNA A230048O21 gene	15		320959
Mm.246108	0910001A06Rik	RIKEN cDNA 0910001A06 gene	15		223601
Human Homolog	FAM49B[family with sequence similarity 49, member B]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 91 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTTAAGAATG (5) 4.9 0.0049 P8 Cb GC CATACGTAAT (2) 1.6 0.0016 P8 Cb GC CTGCATTAAG (4) 1.6 0.0016 P8 Cb GC GTGGGGAAAA (7) 1.6 0.0016 P8 Cb GC TGCAGCCAAA (4) 1.6 0.0016 Cb medulloblastoma CTGCATTAAG (4) 16.2 0.0162 Cb medulloblastoma AGAAAAGTAT (3) 9.2 0.0092 Cb medulloblastoma TTTAAGAATG (5) 6.9 0.0069 Cb medulloblastoma CATACGTAAT (2) 2.3 0.0023 Cb medulloblastoma GTGGGGAAAA (7) 2.3 0.0023 P8 GC+1d culture CTGCATTAAG (4) 3.4 0.0034 P8 GC+1d culture CTGTTTAGAT (8) 3.4 0.0034 P8 GC+1d culture TTTAAGAATG (5) 3.4 0.0034 P8 GC+1d culture GTCCCCGGGA (6) 2.3 0.0023 P8 GC+1d culture AGAAAAGTAT (3) 1.1 0.0011 P8 GC+1d culture CAGGAGAAGC (3) 1.1 0.0011 P8 GC+SHH+1d culture CTGCATTAAG (4) 17.6 0.0176 P8 GC+SHH+1d culture TTTAAGAATG (5) 5.9 0.0059 P8 GC+SHH+1d culture CTGTTTAGAT (8) 2.3 0.0023 P8 GC+SHH+1d culture AGAAAAGTAT (3) 1.2 0.0012 P8 GC+SHH+1d culture TGCAGCCAAA (4) 1.2 0.0012 3T3 fibroblasts GTCCCCGGGA (6) 3.5 0.0035 E15 cortex CTGCATTAAG (4) 9.9 0.0099 E15 cortex GGGAATCTGC (4) 4.9 0.0049 P1 cortex AGAAAAGTAT (3) 18.2 0.0182 P1 cortex CACAGACCTT (4) 4.5 0.0045 Hypothalamus CTGCATTAAG (4) 18.1 0.0181 Hypothalamus AGAAAAGTAT (3) 9.1 0.0091 Hypothalamus TTTAAGAATG (5) 7.2 0.0072 Hypothalamus CAGGAGAAGC (3) 1.8 0.0018 Hypothalamus CATACGTAAT (2) 1.8 0.0018 Hypothalamus GGGAATCTGC (4) 1.8 0.0018 Hypothalamus TGCAGCCAAA (4) 1.8 0.0018 E12.5 retina CTGCATTAAG (4) 7.5 0.0075 E12.5 retina TTTAAGAATG (5) 7.5 0.0075 E14.5 retina CTGCATTAAG (4) 7.3 0.0073 E14.5 retina AGAAAAGTAT (3) 1.8 0.0018 E14.5 retina CTGTTTAGAT (8) 1.8 0.0018 E14.5 retina GTGGGGAAAA (7) 1.8 0.0018 E14.5 retina TTTAAGAATG (5) 1.8 0.0018 E16.5 retina TTTAAGAATG (5) 10.9 0.0109 E16.5 retina AGAAAAGTAT (3) 1.8 0.0018 E16.5 retina CACAGACCTT (4) 1.8 0.0018 E16.5 retina CATACGTAAT (2) 1.8 0.0018 E16.5 retina TGCAGCCAAA (4) 1.8 0.0018 E18.5 retina CTGTTTAGAT (8) 5.5 0.0055 E18.5 retina CTGCATTAAG (4) 3.6 0.0036 E18.5 retina AGAAAAGTAT (3) 1.8 0.0018 E18.5 retina CATACGTAAT (2) 1.8 0.0018 E18.5 retina TCTTATTCTT (2) 1.8 0.0018 E18.5 retina TTTAAGAATG (5) 1.8 0.0018 P0.5 retina CTGCATTAAG (4) 7.9 0.0079 P0.5 retina TTTAAGAATG (5) 7.9 0.0079 P0.5 retina GTCCCCGGGA (6) 2 0.002 P0.5 retina TCTTATTCTT (2) 2 0.002 P2.5 retina CTGCATTAAG (4) 5.3 0.0053 P2.5 retina TTTAAGAATG (5) 5.3 0.0053 P2.5 retina AGAAAAGTAT (3) 3.5 0.0035 P2.5 retina CAGGAGAAGC (3) 1.8 0.0018 P2.5 retina CATACGTAAT (2) 1.8 0.0018 P2.5 retina CTGTTTAGAT (8) 1.8 0.0018 P2.5 retina GTGGGGAAAA (7) 1.8 0.0018 P2.5 retina TCTTATTCTT (2) 1.8 0.0018 P4.5 retina CTGCATTAAG (4) 13.9 0.0139 P4.5 retina CACAGACCTT (4) 2 0.002 P6.5 retina CTGCATTAAG (4) 11.7 0.0117 P6.5 retina AGAAAAGTAT (3) 10 0.01 P6.5 retina TTTAAGAATG (5) 8.3 0.0083 P6.5 retina CTGTTTAGAT (8) 3.3 0.0033 P6.5 retina CAGGAGAAGC (3) 1.7 0.0017 P6.5 retina GTGGGGAAAA (7) 1.7 0.0017 P10.5 crx- retina CTGCATTAAG (4) 5.6 0.0056 P10.5 crx- retina AGAAAAGTAT (3) 1.9 0.0019 P10.5 crx- retina CTGTTTAGAT (8) 1.9 0.0019 P10.5 crx- retina GTCCCCGGGA (6) 1.9 0.0019 P10.5 crx- retina GTGGGGAAAA (7) 1.9 0.0019 P10.5 crx+ retina CTGCATTAAG (4) 11.5 0.0115 P10.5 crx+ retina AGAAAAGTAT (3) 5.8 0.0058 P10.5 crx+ retina TTTAAGAATG (5) 5.8 0.0058 P10.5 crx+ retina CAGGAGAAGC (3) 3.8 0.0038 P10.5 crx+ retina CTGTTTAGAT (8) 3.8 0.0038 P10.5 crx+ retina GTGGGGAAAA (7) 1.9 0.0019 P10.5 crx+ retina TGCAGCCAAA (4) 1.9 0.0019 Adult retinal AGAAAAGTAT (3) 1.9 0.0019 Adult retinal CAGGAGAAGC (3) 1.9 0.0019 Adult retinal CTGCATTAAG (4) 1.9 0.0019 Adult retinal GTGGGGAAAA (7) 1.9 0.0019 Adult retinal TTTAAGAATG (5) 1.9 0.0019 ONL CTGCATTAAG (4) 7.7 0.0077 ONL GGGAATCTGC (4) 1.9 0.0019 ONL TTTAAGAATG (5) 1.9 0.0019