Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.246412	1700020I14Rik	RIKEN cDNA 1700020I14 gene	2		66602
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 17 In Situ Hybridization Images

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SAGE Tags

Total 222 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAA (658) 203.9 0.2039 P8 Cb GC AGCAGAGAAT (3) 14.7 0.0147 P8 Cb GC AAGACAGCTA (5) 9.8 0.0098 P8 Cb GC AGACCCTGTC (35) 6.5 0.0065 P8 Cb GC AAGGCTCACA (5) 3.3 0.0033 P8 Cb GC CTTGGGAATA (2) 3.3 0.0033 P8 Cb GC TGGTTGTTGG (20) 3.3 0.0033 P8 Cb GC CAAAACAGAA (6) 1.6 0.0016 P8 Cb GC CTTTATTGCT 1.6 0.0016 P8 Cb GC GACTTGGGTC (2) 1.6 0.0016 P8 Cb GC GTTTTGTTTT (8) 1.6 0.0016 P8 Cb GC TAAGCTGGCA 1.6 0.0016 P8 Cb GC TTTATTTTTT (13) 1.6 0.0016 Cb medulloblastoma AAAAAAAAAA (658) 797.8 0.7978 Cb medulloblastoma AGCAGAGAAT (3) 46.2 0.0462 Cb medulloblastoma AGACCCTGTC (35) 20.8 0.0208 Cb medulloblastoma AAGGCTCACA (5) 18.5 0.0185 Cb medulloblastoma AAGACAGCTA (5) 9.2 0.0092 Cb medulloblastoma GGTGGATCCC 6.9 0.0069 Cb medulloblastoma GTTTAGGATG 4.6 0.0046 Cb medulloblastoma TATCCCAGGC (5) 4.6 0.0046 Cb medulloblastoma GTGGGTACAT (2) 2.3 0.0023 Cb medulloblastoma TAAGCTGGCA 2.3 0.0023 Cb medulloblastoma TGAGACTGGG 2.3 0.0023 P8 GC+1d culture AAAAAAAAAA (658) 204.3 0.2043 P8 GC+1d culture AGCAGAGAAT (3) 14.8 0.0148 P8 GC+1d culture AAGACAGCTA (5) 5.7 0.0057 P8 GC+1d culture AAGGCTCACA (5) 5.7 0.0057 P8 GC+1d culture AGACCCTGTC (35) 4.6 0.0046 P8 GC+1d culture AGCAGAGAAA (9) 4.6 0.0046 P8 GC+1d culture TTTATTTTTT (13) 3.4 0.0034 P8 GC+1d culture TGGTTGTTGG (20) 2.3 0.0023 P8 GC+1d culture AGGTAAAGGA (2) 1.1 0.0011 P8 GC+1d culture CTTGGGAATA (2) 1.1 0.0011 P8 GC+1d culture GTTTAGGATG 1.1 0.0011 P8 GC+1d culture TATCCCAGGC (5) 1.1 0.0011 P8 GC+1d culture TATTACATTA (2) 1.1 0.0011 P8 GC+1d culture TGAGACTGGG 1.1 0.0011 P8 GC+1d culture TGGCCACTTA (3) 1.1 0.0011 P8 GC+SHH+1d culture AAAAAAAAAA (658) 278.7 0.2787 P8 GC+SHH+1d culture AGCAGAGAAT (3) 29.3 0.0293 P8 GC+SHH+1d culture AAGACAGCTA (5) 14.1 0.0141 P8 GC+SHH+1d culture AAGGCTCACA (5) 8.2 0.0082 P8 GC+SHH+1d culture TTTATTTTTT (13) 4.7 0.0047 P8 GC+SHH+1d culture AGTGTTTTCT (8) 3.5 0.0035 P8 GC+SHH+1d culture CTTGGGAATA (2) 3.5 0.0035 P8 GC+SHH+1d culture GTTTTGTTTT (8) 2.3 0.0023 P8 GC+SHH+1d culture AATATTTATT (6) 1.2 0.0012 P8 GC+SHH+1d culture AGACCCTGTC (35) 1.2 0.0012 P8 GC+SHH+1d culture AGCAGAGAAA (9) 1.2 0.0012 P8 GC+SHH+1d culture AGGTAAAGGA (2) 1.2 0.0012 P8 GC+SHH+1d culture GACTTGGGTC (2) 1.2 0.0012 P8 GC+SHH+1d culture GTGGGTACAT (2) 1.2 0.0012 P8 GC+SHH+1d culture TATCCCAGGC (5) 1.2 0.0012 P8 GC+SHH+1d culture TGAGACTGGG 1.2 0.0012 P8 GC+SHH+1d culture TGGTTGTTGG (20) 1.2 0.0012 3T3 fibroblasts AAAAAAAAAA (658) 28 0.028 3T3 fibroblasts GACTTGGGTC (2) 7 0.007 3T3 fibroblasts AAGACAGCTA (5) 3.5 0.0035 3T3 fibroblasts AAGGCTCACA (5) 3.5 0.0035 3T3 fibroblasts GTGGGTACAT (2) 3.5 0.0035 E15 cortex AAAAAAAAAA (658) 212.8 0.2128 E15 cortex AAGGCTCACA (5) 14.8 0.0148 E15 cortex AGACCCTGTC (35) 14.8 0.0148 E15 cortex GTAGCTGGCT 9.9 0.0099 E15 cortex AGCAGAGAAT (3) 4.9 0.0049 E15 cortex AGGTAAAGGA (2) 4.9 0.0049 E15 cortex TGGTTGTTGG (20) 4.9 0.0049 P1 cortex AAAAAAAAAA (658) 245.4 0.2454 P1 cortex AGCAGAGAAT (3) 27.3 0.0273 P1 cortex AAGACAGCTA (5) 9.1 0.0091 P1 cortex AGGTAAAGGA (2) 9.1 0.0091 P1 cortex TGGTTGTTGG (20) 9.1 0.0091 P1 cortex AAGGCTCACA (5) 4.5 0.0045 P1 cortex AGACCCTGTC (35) 4.5 0.0045 P1 cortex TATTACATTA (2) 4.5 0.0045 Hypothalamus AAAAAAAAAA (658) 123.2 0.1232 Hypothalamus TGGTTGTTGG (20) 19.9 0.0199 Hypothalamus AAGGCTCACA (5) 16.3 0.0163 Hypothalamus AAGACAGCTA (5) 7.2 0.0072 Hypothalamus AGCAGAGAAT (3) 7.2 0.0072 Hypothalamus AGACCCTGTC (35) 1.8 0.0018 Hypothalamus CTTTATTGCT 1.8 0.0018 Hypothalamus GTGGGTACAT (2) 1.8 0.0018 Hypothalamus GTGGTACATA (4) 1.8 0.0018 Hypothalamus TGGCCACTTA (3) 1.8 0.0018 E12.5 retina AAAAAAAAAA (658) 138.9 0.1389 E12.5 retina AGCAGAGAAT (3) 18.8 0.0188 E12.5 retina AAGACAGCTA (5) 16.9 0.0169 E12.5 retina AAGGCTCACA (5) 5.6 0.0056 E12.5 retina AGACCCTGTC (35) 5.6 0.0056 E12.5 retina TGGTTGTTGG (20) 5.6 0.0056 E12.5 retina CTTGGGAATA (2) 3.8 0.0038 E12.5 retina GTTTTGTTTT (8) 3.8 0.0038 E12.5 retina AGTGTTTTCT (8) 1.9 0.0019 E12.5 retina CAAAACAGAA (6) 1.9 0.0019 E12.5 retina TATCCCAGGC (5) 1.9 0.0019 E14.5 retina AAAAAAAAAA (658) 94.7 0.0947 E14.5 retina TGGTTGTTGG (20) 38.3 0.0383 E14.5 retina AAGACAGCTA (5) 27.3 0.0273 E14.5 retina AAGGCTCACA (5) 21.9 0.0219 E14.5 retina AGCAGAGAAT (3) 10.9 0.0109 E14.5 retina AGACCCTGTC (35) 5.5 0.0055 E14.5 retina AGTGTTTTCT (8) 5.5 0.0055 E14.5 retina AATATTTATT (6) 3.6 0.0036 E14.5 retina TTTATTTTTT (13) 3.6 0.0036 E14.5 retina AGCAGAGAAA (9) 1.8 0.0018 E14.5 retina CTTTATTGCT 1.8 0.0018 E14.5 retina GTAGCTGGCT 1.8 0.0018 E14.5 retina TATTACATTA (2) 1.8 0.0018 E14.5 retina TGAGACTGGG 1.8 0.0018 E16.5 retina AAAAAAAAAA (658) 43.5 0.0435 E16.5 retina TGGTTGTTGG (20) 16.3 0.0163 E16.5 retina AAGACAGCTA (5) 14.5 0.0145 E16.5 retina AGCAGAGAAT (3) 14.5 0.0145 E16.5 retina AAGGCTCACA (5) 10.9 0.0109 E16.5 retina AGACCCTGTC (35) 3.6 0.0036 E16.5 retina AGTGTTTTCT (8) 3.6 0.0036 E16.5 retina GTGGTACATA (4) 3.6 0.0036 E16.5 retina AGGTAAAGGA (2) 1.8 0.0018 E16.5 retina GTGGGTACAT (2) 1.8 0.0018 E16.5 retina GTTCACCTTT 1.8 0.0018 E16.5 retina TAAAAGCCTG (2) 1.8 0.0018 E16.5 retina TATTACATTA (2) 1.8 0.0018 E18.5 retina AAAAAAAAAA (658) 374.7 0.3747 E18.5 retina AGCAGAGAAT (3) 38.2 0.0382 E18.5 retina AAGACAGCTA (5) 14.6 0.0146 E18.5 retina AGACCCTGTC (35) 10.9 0.0109 E18.5 retina AAGGCTCACA (5) 7.3 0.0073 E18.5 retina TGGTTGTTGG (20) 5.5 0.0055 E18.5 retina AGTGTTTTCT (8) 3.6 0.0036 E18.5 retina AGCAGAGAAA (9) 1.8 0.0018 E18.5 retina CAAAACAGAA (6) 1.8 0.0018 E18.5 retina GTTCACCTTT 1.8 0.0018 E18.5 retina TATTACATTA (2) 1.8 0.0018 E18.5 retina TTTATTTTTT (13) 1.8 0.0018 P0.5 retina AAAAAAAAAA (658) 117.8 0.1178 P0.5 retina AGCAGAGAAT (3) 5.9 0.0059 P0.5 retina AGGTAAAGGA (2) 5.9 0.0059 P0.5 retina AGTGTTTTCT (8) 5.9 0.0059 P0.5 retina AAGACAGCTA (5) 3.9 0.0039 P0.5 retina AAGGCTCACA (5) 2 0.002 P0.5 retina AGACCCTGTC (35) 2 0.002 P0.5 retina CTTGGGAATA (2) 2 0.002 P0.5 retina TAAAAGCCTG (2) 2 0.002 P0.5 retina TATCCCAGGC (5) 2 0.002 P0.5 retina TGGCCACTTA (3) 2 0.002 P2.5 retina AAAAAAAAAA (658) 329.1 0.3291 P2.5 retina AGCAGAGAAT (3) 28.2 0.0282 P2.5 retina AAGACAGCTA (5) 19.4 0.0194 P2.5 retina AAGGCTCACA (5) 14.1 0.0141 P2.5 retina AGACCCTGTC (35) 12.3 0.0123 P2.5 retina TGGTTGTTGG (20) 7 0.007 P2.5 retina AGCAGAGAAA (9) 3.5 0.0035 P2.5 retina AGTGTTTTCT (8) 3.5 0.0035 P2.5 retina TATTACATTA (2) 3.5 0.0035 P2.5 retina TTTATTTTTT (13) 3.5 0.0035 P2.5 retina CAAAACAGAA (6) 1.8 0.0018 P2.5 retina CTTTATTGCT 1.8 0.0018 P2.5 retina GTGGTACATA (4) 1.8 0.0018 P2.5 retina GTTCACCTTT 1.8 0.0018 P4.5 retina AAAAAAAAAA (658) 283.3 0.2833 P4.5 retina AGCAGAGAAT (3) 37.6 0.0376 P4.5 retina TGGTTGTTGG (20) 11.9 0.0119 P4.5 retina AAGACAGCTA (5) 7.9 0.0079 P4.5 retina AGACCCTGTC (35) 7.9 0.0079 P4.5 retina AAGGCTCACA (5) 4 0.004 P4.5 retina AGCAGAGAAA (9) 2 0.002 P4.5 retina AGGTAAAGGA (2) 2 0.002 P4.5 retina AGTGTTTTCT (8) 2 0.002 P4.5 retina TAAAAGCCTG (2) 2 0.002 P4.5 retina TAAGCTGGCA 2 0.002 P6.5 retina AAAAAAAAAA (658) 266.8 0.2668 P6.5 retina AGCAGAGAAT (3) 26.7 0.0267 P6.5 retina AAGACAGCTA (5) 16.7 0.0167 P6.5 retina AAGGCTCACA (5) 16.7 0.0167 P6.5 retina AGACCCTGTC (35) 6.7 0.0067 P6.5 retina TGGTTGTTGG (20) 5 0.005 P6.5 retina GTTTTGTTTT (8) 3.3 0.0033 P6.5 retina TTTATTTTTT (13) 1.7 0.0017 P10.5 crx- retina AAAAAAAAAA (658) 44.6 0.0446 P10.5 crx- retina AGCAGAGAAT (3) 26 0.026 P10.5 crx- retina AAGGCTCACA (5) 14.9 0.0149 P10.5 crx- retina AAGACAGCTA (5) 9.3 0.0093 P10.5 crx- retina TGGTTGTTGG (20) 7.4 0.0074 P10.5 crx- retina TTTATTTTTT (13) 3.7 0.0037 P10.5 crx- retina AGACCCTGTC (35) 1.9 0.0019 P10.5 crx- retina CTTTATTGCT 1.9 0.0019 P10.5 crx- retina TATTACATTA (2) 1.9 0.0019 P10.5 crx+ retina AAAAAAAAAA (658) 96.1 0.0961 P10.5 crx+ retina AGCAGAGAAT (3) 46.1 0.0461 P10.5 crx+ retina AAGGCTCACA (5) 19.2 0.0192 P10.5 crx+ retina AGACCCTGTC (35) 11.5 0.0115 P10.5 crx+ retina AAGACAGCTA (5) 5.8 0.0058 P10.5 crx+ retina CTTGGGAATA (2) 3.8 0.0038 P10.5 crx+ retina TGGTTGTTGG (20) 3.8 0.0038 P10.5 crx+ retina TATTACATTA (2) 1.9 0.0019 Adult retinal AAAAAAAAAA (658) 57.4 0.0574 Adult retinal AGCAGAGAAT (3) 31.5 0.0315 Adult retinal AAGGCTCACA (5) 13 0.013 Adult retinal AGACCCTGTC (35) 13 0.013 Adult retinal AAGACAGCTA (5) 7.4 0.0074 Adult retinal TGGTTGTTGG (20) 7.4 0.0074 Adult retinal CTTGGGAATA (2) 1.9 0.0019 Adult retinal CTTTATTGCT 1.9 0.0019 Adult retinal GACTTGGGTC (2) 1.9 0.0019 Adult retinal GTTTTGTTTT (8) 1.9 0.0019 Adult retinal TGAGACTGGG 1.9 0.0019 ONL AAAAAAAAAA (658) 103.4 0.1034 ONL AGCAGAGAAT (3) 30.6 0.0306 ONL AAGGCTCACA (5) 17.2 0.0172 ONL AGACCCTGTC (35) 17.2 0.0172 ONL AAGACAGCTA (5) 13.4 0.0134 ONL TGGTTGTTGG (20) 11.5 0.0115 ONL GTTTTGTTTT (8) 5.7 0.0057 ONL TTTATTTTTT (13) 3.8 0.0038 ONL AATATTTATT (6) 1.9 0.0019 ONL CTTGGGAATA (2) 1.9 0.0019 ONL CTTTATTGCT 1.9 0.0019 ONL GACTTGGGTC (2) 1.9 0.0019 ONL TAAAAGCCTG (2) 1.9 0.0019 ONL TATTACATTA (2) 1.9 0.0019