Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.246493	Thrap4	thyroid hormone receptor associated protein 4	11	11 D (11 56.5 cM)	23989
Gene Ontology	mediator complex | receptor activity | transcription from Pol II promoter
Human Homolog	THRAP4[thyroid hormone receptor associated protein 4]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 46 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AATGGGGAGT (3) 1.6 0.0016 Cb medulloblastoma AATGGGGAGT (3) 6.9 0.0069 Cb medulloblastoma TGTTGTGTTC (6) 2.3 0.0023 P8 GC+1d culture TGTTGTGTTC (6) 6.8 0.0068 P8 GC+1d culture AATGGGGAGT (3) 4.6 0.0046 P8 GC+1d culture GCCAGGGAGA (7) 2.3 0.0023 P8 GC+SHH+1d culture TGTTGTGTTC (6) 5.9 0.0059 P8 GC+SHH+1d culture AATGGGGAGT (3) 4.7 0.0047 P8 GC+SHH+1d culture GCCAGGGAGA (7) 2.3 0.0023 P8 GC+SHH+1d culture TTGTGTGACC (3) 1.2 0.0012 3T3 fibroblasts GCCAGGGAGA (7) 7 0.007 3T3 fibroblasts AATGGGGAGT (3) 3.5 0.0035 E15 cortex GCCAGGGAGA (7) 9.9 0.0099 E15 cortex AATGGGGAGT (3) 4.9 0.0049 P1 cortex GCCAGGGAGA (7) 4.5 0.0045 Hypothalamus TGTTGTGTTC (6) 3.6 0.0036 Hypothalamus AATGGGGAGT (3) 1.8 0.0018 Hypothalamus GAGAGAAGAT 1.8 0.0018 E12.5 retina AATGGGGAGT (3) 3.8 0.0038 E12.5 retina GCCAGGGAGA (7) 1.9 0.0019 E14.5 retina AATGGGGAGT (3) 5.5 0.0055 E14.5 retina GCCAGGGAGA (7) 1.8 0.0018 E16.5 retina AATGGGGAGT (3) 5.4 0.0054 E16.5 retina TGTTGTGTTC (6) 3.6 0.0036 E18.5 retina AATGGGGAGT (3) 5.5 0.0055 P0.5 retina TGTTGTGTTC (6) 13.7 0.0137 P0.5 retina GCCAGGGAGA (7) 3.9 0.0039 P0.5 retina AATGGGGAGT (3) 2 0.002 P2.5 retina AATGGGGAGT (3) 8.8 0.0088 P2.5 retina TGTTGTGTTC (6) 1.8 0.0018 P4.5 retina AATGGGGAGT (3) 15.9 0.0159 P4.5 retina TGTTGTGTTC (6) 5.9 0.0059 P4.5 retina GAGAGAAGAT 2 0.002 P6.5 retina AATGGGGAGT (3) 20 0.02 P6.5 retina GAGAGAAGAT 3.3 0.0033 P6.5 retina TGTTGTGTTC (6) 3.3 0.0033 P6.5 retina GCCAGGGAGA (7) 1.7 0.0017 P10.5 crx- retina AATGGGGAGT (3) 1.9 0.0019 P10.5 crx- retina GCCAGGGAGA (7) 1.9 0.0019 P10.5 crx- retina TGTTGTGTTC (6) 1.9 0.0019 P10.5 crx+ retina AATGGGGAGT (3) 3.8 0.0038 P10.5 crx+ retina TGTTGTGTTC (6) 1.9 0.0019 Adult retinal AATGGGGAGT (3) 3.7 0.0037 Adult retinal TGTTGTGTTC (6) 1.9 0.0019 ONL AATGGGGAGT (3) 3.8 0.0038 ONL TTGTGTGACC (3) 1.9 0.0019