Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.246767
AU019899
expressed sequence AU019899
17
106710
Mm.246767
Thada
thyroid adenoma associated
17
240174
Human Homolog
THADA[thyroid adenoma associated]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 50 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
ACAAAAAAAA (
31
)
6.5
0.0065
P8 Cb GC
AAGAGGAACA (
4
)
1.6
0.0016
P8 Cb GC
TCTCTCTCTC
(
3
)
1.6
0.0016
Cb medulloblastoma
ACAAAAAAAA (
31
)
34.7
0.0347
Cb medulloblastoma
CTTTTTCATC (
5
)
4.6
0.0046
Cb medulloblastoma
AAGAGGAACA (
4
)
2.3
0.0023
Cb medulloblastoma
CCAGCCATAG
(
2
)
2.3
0.0023
P8 GC+1d culture
ACAAAAAAAA (
31
)
5.7
0.0057
P8 GC+1d culture
AAGAGGAACA (
4
)
1.1
0.0011
P8 GC+1d culture
ACATAAAAAA (
4
)
1.1
0.0011
P8 GC+SHH+1d culture
ACAAAAAAAA (
31
)
14.1
0.0141
P8 GC+SHH+1d culture
AAGAGGAACA (
4
)
1.2
0.0012
3T3 fibroblasts
AAGAGGAACA (
4
)
7
0.007
E15 cortex
ACAAAAAAAA (
31
)
4.9
0.0049
P1 cortex
AAGAGGAACA (
4
)
4.5
0.0045
P1 cortex
ACAAAAAAAA (
31
)
4.5
0.0045
Hypothalamus
ACAAAAAAAA (
31
)
10.9
0.0109
Hypothalamus
GAAACTTTGA (
5
)
3.6
0.0036
Hypothalamus
AAGAGGAACA (
4
)
1.8
0.0018
Hypothalamus
CTTTTTCATC (
5
)
1.8
0.0018
E12.5 retina
AAGAGGAACA (
4
)
9.4
0.0094
E12.5 retina
CTTTTTCATC (
5
)
3.8
0.0038
E12.5 retina
ACAAAAAAAA (
31
)
1.9
0.0019
E14.5 retina
AAGAGGAACA (
4
)
5.5
0.0055
E14.5 retina
ACAAAAAAAA (
31
)
5.5
0.0055
E14.5 retina
CCAGCCATAG
(
2
)
1.8
0.0018
E16.5 retina
AAGAGGAACA (
4
)
3.6
0.0036
E16.5 retina
ACAAAAAAAA (
31
)
1.8
0.0018
E16.5 retina
CTTTTTCATC (
5
)
1.8
0.0018
E18.5 retina
ACAAAAAAAA (
31
)
14.6
0.0146
E18.5 retina
AAGAGGAACA (
4
)
3.6
0.0036
E18.5 retina
ACATAAAAAA (
4
)
3.6
0.0036
E18.5 retina
CTTTTTCATC (
5
)
1.8
0.0018
P0.5 retina
AAGAGGAACA (
4
)
5.9
0.0059
P0.5 retina
ACAAAAAAAA (
31
)
5.9
0.0059
P0.5 retina
CTTTTTCATC (
5
)
2
0.002
P2.5 retina
ACAAAAAAAA (
31
)
5.3
0.0053
P2.5 retina
AAGAGGAACA (
4
)
1.8
0.0018
P4.5 retina
ACAAAAAAAA (
31
)
5.9
0.0059
P4.5 retina
AAGAGGAACA (
4
)
4
0.004
P6.5 retina
ACAAAAAAAA (
31
)
1.7
0.0017
P6.5 retina
CTTTTTCATC (
5
)
1.7
0.0017
P10.5 crx- retina
ACAAAAAAAA (
31
)
1.9
0.0019
P10.5 crx- retina
TCTCTCTCTC
(
3
)
1.9
0.0019
P10.5 crx+ retina
ACAAAAAAAA (
31
)
11.5
0.0115
P10.5 crx+ retina
AAGAGGAACA (
4
)
1.9
0.0019
Adult retinal
AAGAGGAACA (
4
)
1.9
0.0019
Adult retinal
GAAACTTTGA (
5
)
1.9
0.0019
ONL
ACAAAAAAAA (
31
)
5.7
0.0057
ONL
TCTCTCTCTC
(
3
)
1.9
0.0019
