Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.25181	9230115F04Rik	RIKEN cDNA 9230115F04 gene	4		320841
Mm.25181	Zcchc11	zinc finger, CCHC domain containing 11	4		230594
Gene Ontology	nucleic acid binding
Human Homolog	ZCCHC11[zinc finger, CCHC domain containing 11]

No In Situ Hybridization images could be found.



SAGE Tags

Total 59 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCTTTAATCC (355) 52.2 0.0522 P8 Cb GC GTGGCACACA (30) 6.5 0.0065 P8 Cb GC ATTAAAAAAA (10) 1.6 0.0016 Cb medulloblastoma CCTTTAATCC (355) 41.6 0.0416 Cb medulloblastoma GTGGCACACA (30) 11.6 0.0116 Cb medulloblastoma CCCAGCTTTT (11) 2.3 0.0023 P8 GC+1d culture CCTTTAATCC (355) 32 0.032 P8 GC+1d culture GTGGCACACA (30) 13.7 0.0137 P8 GC+1d culture ATTAAAAAAA (10) 2.3 0.0023 P8 GC+SHH+1d culture CCTTTAATCC (355) 25.8 0.0258 P8 GC+SHH+1d culture ATTAAAAAAA (10) 4.7 0.0047 P8 GC+SHH+1d culture GTGGCACACA (30) 2.3 0.0023 3T3 fibroblasts CCTTTAATCC (355) 70.1 0.0701 3T3 fibroblasts GTGGCACACA (30) 14 0.014 3T3 fibroblasts ATTAAAAAAA (10) 3.5 0.0035 E15 cortex CCTTTAATCC (355) 54.4 0.0544 E15 cortex GTGGCACACA (30) 24.7 0.0247 P1 cortex CCTTTAATCC (355) 154.5 0.1545 P1 cortex GTGGCACACA (30) 4.5 0.0045 Hypothalamus CCTTTAATCC (355) 19.9 0.0199 Hypothalamus GTGGCACACA (30) 7.2 0.0072 Hypothalamus ATTAAAAAAA (10) 3.6 0.0036 Hypothalamus CCCAGCTTTT (11) 1.8 0.0018 E12.5 retina CCTTTAATCC (355) 75.1 0.0751 E12.5 retina GTGGCACACA (30) 11.3 0.0113 E12.5 retina ATTAAAAAAA (10) 1.9 0.0019 E14.5 retina CCTTTAATCC (355) 120.3 0.1203 E14.5 retina GTGGCACACA (30) 18.2 0.0182 E14.5 retina ATTAAAAAAA (10) 10.9 0.0109 E16.5 retina CCTTTAATCC (355) 68.8 0.0688 E16.5 retina GTGGCACACA (30) 9.1 0.0091 E16.5 retina ATTAAAAAAA (10) 3.6 0.0036 E18.5 retina CCTTTAATCC (355) 23.6 0.0236 E18.5 retina ATTAAAAAAA (10) 9.1 0.0091 E18.5 retina GTGGCACACA (30) 5.5 0.0055 E18.5 retina CCCAGCTTTT (11) 1.8 0.0018 E18.5 retina GCCTTCCAGA (4) 1.8 0.0018 P0.5 retina CCTTTAATCC (355) 72.6 0.0726 P0.5 retina GTGGCACACA (30) 11.8 0.0118 P2.5 retina CCTTTAATCC (355) 70.4 0.0704 P2.5 retina GTGGCACACA (30) 17.6 0.0176 P2.5 retina ATTAAAAAAA (10) 1.8 0.0018 P4.5 retina CCTTTAATCC (355) 43.6 0.0436 P4.5 retina GTGGCACACA (30) 11.9 0.0119 P4.5 retina ATTAAAAAAA (10) 2 0.002 P6.5 retina CCTTTAATCC (355) 70 0.07 P6.5 retina GTGGCACACA (30) 26.7 0.0267 P10.5 crx- retina CCTTTAATCC (355) 63.2 0.0632 P10.5 crx- retina GTGGCACACA (30) 13 0.013 P10.5 crx- retina ATTAAAAAAA (10) 1.9 0.0019 P10.5 crx+ retina CCTTTAATCC (355) 38.4 0.0384 P10.5 crx+ retina GTGGCACACA (30) 7.7 0.0077 Adult retinal CCTTTAATCC (355) 129.6 0.1296 Adult retinal GTGGCACACA (30) 5.6 0.0056 Adult retinal GCCTTCCAGA (4) 3.7 0.0037 Adult retinal CCCAGCTTTT (11) 1.9 0.0019 ONL CCTTTAATCC (355) 84.3 0.0843 ONL GTGGCACACA (30) 24.9 0.0249 ONL GCCTTCCAGA (4) 1.9 0.0019