Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.252156	Tcf20	transcription factor 20	15		21411
Gene Ontology	DNA binding | nucleus | regulation of transcription, DNA-dependent | transcription factor activity | transcription factor complex
Human Homolog	TCF20[transcription factor 20 (AR1)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 49 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGGGTGCCCT (3) 6.5 0.0065 P8 Cb GC CTATGTGATT 1.6 0.0016 P8 Cb GC GATGCTGTGG (7) 1.6 0.0016 Cb medulloblastoma TGGGTGCCCT (3) 4.6 0.0046 Cb medulloblastoma GATGCTGTGG (7) 2.3 0.0023 P8 GC+1d culture TGGGTGCCCT (3) 3.4 0.0034 P8 GC+1d culture TAGTAAATAA 1.1 0.0011 P8 GC+SHH+1d culture TGGGTGCCCT (3) 3.5 0.0035 P8 GC+SHH+1d culture CTATGTGATT 1.2 0.0012 3T3 fibroblasts GTCATAGCTG (590) 10.5 0.0105 3T3 fibroblasts ATGTTGGGGC 3.5 0.0035 3T3 fibroblasts GATGCTGTGG (7) 3.5 0.0035 3T3 fibroblasts TGGGTGCCCT (3) 3.5 0.0035 E15 cortex CTATGTGATT 4.9 0.0049 E15 cortex GATGCTGTGG (7) 4.9 0.0049 E15 cortex GTCATAGCTG (590) 4.9 0.0049 E15 cortex TGGGTGCCCT (3) 4.9 0.0049 P1 cortex ATGTTGGGGC 4.5 0.0045 Hypothalamus GATGCTGTGG (7) 1.8 0.0018 Hypothalamus TGGGTGCCCT (3) 1.8 0.0018 E12.5 retina GATGCTGTGG (7) 9.4 0.0094 E12.5 retina TGGGTGCCCT (3) 5.6 0.0056 E14.5 retina GATGCTGTGG (7) 1.8 0.0018 E16.5 retina TGGGTGCCCT (3) 9.1 0.0091 E16.5 retina CTATGTGATT 1.8 0.0018 E16.5 retina TAGTAAATAA 1.8 0.0018 E18.5 retina TGGGTGCCCT (3) 1.8 0.0018 P0.5 retina TGGGTGCCCT (3) 11.8 0.0118 P0.5 retina GGCAACATAT 5.9 0.0059 P0.5 retina GATGCTGTGG (7) 3.9 0.0039 P0.5 retina GTCATAGCTG (590) 3.9 0.0039 P2.5 retina ATGTTGGGGC 1.8 0.0018 P2.5 retina GTCATAGCTG (590) 1.8 0.0018 P4.5 retina TGGGTGCCCT (3) 4 0.004 P4.5 retina GGCAACATAT 2 0.002 P4.5 retina GTCATAGCTG (590) 2 0.002 P6.5 retina CTATGTGATT 3.3 0.0033 P6.5 retina GTCATAGCTG (590) 3.3 0.0033 P6.5 retina ATGTTGGGGC 1.7 0.0017 P6.5 retina TAGTAAATAA 1.7 0.0017 P6.5 retina TGGGTGCCCT (3) 1.7 0.0017 P10.5 crx- retina TGGGTGCCCT (3) 3.7 0.0037 P10.5 crx- retina CTATGTGATT 1.9 0.0019 P10.5 crx+ retina GATGCTGTGG (7) 1.9 0.0019 P10.5 crx+ retina TGGGTGCCCT (3) 1.9 0.0019 Adult retinal GTCATAGCTG (590) 1.9 0.0019 ONL GGCAACATAT 5.7 0.0057 ONL GTCATAGCTG (590) 5.7 0.0057 ONL CTATGTGATT 1.9 0.0019