Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.252156	Tcf20	transcription factor 20	15		21411
Gene Ontology	DNA binding | nucleus | regulation of transcription, DNA-dependent | transcription factor activity | transcription factor complex
Human Homolog	TCF20[transcription factor 20 (AR1)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 49 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTATGTGATT GATGCTGTGG (2) TGGGTGCCCT (2) 9.7 0.0097 Cb medulloblastoma GATGCTGTGG (2) TGGGTGCCCT (2) 6.9 0.0069 P8 GC+1d culture TAGTAAATAA TGGGTGCCCT (2) 4.5 0.0045 P8 GC+SHH+1d culture CTATGTGATT TGGGTGCCCT (2) 4.7 0.0047 3T3 fibroblasts ATGTTGGGGC GATGCTGTGG (2) GTCATAGCTG (2) TGGGTGCCCT (2) 21 0.021 E15 cortex CTATGTGATT GATGCTGTGG (2) GTCATAGCTG (2) TGGGTGCCCT (2) 19.6 0.0196 P1 cortex ATGTTGGGGC 4.5 0.0045 Hypothalamus GATGCTGTGG (2) TGGGTGCCCT (2) 3.6 0.0036 E12.5 retina GATGCTGTGG (2) TGGGTGCCCT (2) 15 0.015 E14.5 retina GATGCTGTGG (2) 1.8 0.0018 E16.5 retina CTATGTGATT TAGTAAATAA TGGGTGCCCT (2) 12.7 0.0127 E18.5 retina TGGGTGCCCT (2) 1.8 0.0018 P0.5 retina GATGCTGTGG (2) GGCAACATAT GTCATAGCTG (2) TGGGTGCCCT (2) 25.5 0.0255 P2.5 retina ATGTTGGGGC GTCATAGCTG (2) 3.6 0.0036 P4.5 retina GGCAACATAT GTCATAGCTG (2) TGGGTGCCCT (2) 8 0.008 P6.5 retina ATGTTGGGGC CTATGTGATT GTCATAGCTG (2) TAGTAAATAA TGGGTGCCCT (2) 11.7 0.0117 P10.5 crx- retina CTATGTGATT TGGGTGCCCT (2) 5.6 0.0056 P10.5 crx+ retina GATGCTGTGG (2) TGGGTGCCCT (2) 3.8 0.0038 Adult retinal GTCATAGCTG (2) 1.9 0.0019 ONL CTATGTGATT GGCAACATAT GTCATAGCTG (2) 13.3 0.0133