Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.254134	Gpiap1	GPI-anchored membrane protein 1	2		53872
Human Homolog	M11S1[membrane component, chromosome 11, surface marker 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 196 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCTCCCTCTG (3) 16.3 0.0163 P8 Cb GC ACAGTGCCTG (5) 11.4 0.0114 P8 Cb GC TTTCTAAAAA (7) 4.9 0.0049 P8 Cb GC GAGCATACTT (4) 3.3 0.0033 P8 Cb GC AAAAAAAAGG (6) 1.6 0.0016 P8 Cb GC ACCTTCCAAT 1.6 0.0016 P8 Cb GC AGTTTAAGGG (3) 1.6 0.0016 P8 Cb GC CATTGCTAGT 1.6 0.0016 P8 Cb GC GCCTCGGTCT (2) 1.6 0.0016 P8 Cb GC TAAATTTGCT (2) 1.6 0.0016 P8 Cb GC TTTTCTCCTG (4) 1.6 0.0016 Cb medulloblastoma ACAGTGCCTG (5) 9.2 0.0092 Cb medulloblastoma GGGGGGGGGG (112) 6.9 0.0069 Cb medulloblastoma GCTCCCTCTG (3) 4.6 0.0046 Cb medulloblastoma TAAATTTGCT (2) 4.6 0.0046 Cb medulloblastoma TTTCTAAAAA (7) 2.3 0.0023 Cb medulloblastoma TTTTTCTACA (2) 2.3 0.0023 P8 GC+1d culture ACAGTGCCTG (5) 14.8 0.0148 P8 GC+1d culture GCTCCCTCTG (3) 14.8 0.0148 P8 GC+1d culture TAAATTTGCT (2) 9.1 0.0091 P8 GC+1d culture GAGAAATAAT (2) 5.7 0.0057 P8 GC+1d culture AGTTTAAGGG (3) 2.3 0.0023 P8 GC+1d culture GAGCATACTT (4) 2.3 0.0023 P8 GC+1d culture GGGGGGGGGG (112) 2.3 0.0023 P8 GC+1d culture TAATAAATAT (5) 2.3 0.0023 P8 GC+1d culture TTTTTCTACA (2) 2.3 0.0023 P8 GC+1d culture ACCTTCCAAT 1.1 0.0011 P8 GC+1d culture CATTGCTAGT 1.1 0.0011 P8 GC+1d culture TTTCTAAAAA (7) 1.1 0.0011 P8 GC+SHH+1d culture GCTCCCTCTG (3) 15.2 0.0152 P8 GC+SHH+1d culture ACAGTGCCTG (5) 8.2 0.0082 P8 GC+SHH+1d culture GGGGGGGGGG (112) 7 0.007 P8 GC+SHH+1d culture TTTCTAAAAA (7) 5.9 0.0059 P8 GC+SHH+1d culture AGTTTAAGGG (3) 4.7 0.0047 P8 GC+SHH+1d culture GAGCATACTT (4) 4.7 0.0047 P8 GC+SHH+1d culture GAGAAATAAT (2) 3.5 0.0035 P8 GC+SHH+1d culture TTTTTCTACA (2) 3.5 0.0035 P8 GC+SHH+1d culture GACTGGAATG (4) 2.3 0.0023 P8 GC+SHH+1d culture TAAATTTGCT (2) 2.3 0.0023 P8 GC+SHH+1d culture TTTAGTTTTT (2) 2.3 0.0023 P8 GC+SHH+1d culture AAAAAAAAGG (6) 1.2 0.0012 P8 GC+SHH+1d culture ACCTTCCAAT 1.2 0.0012 P8 GC+SHH+1d culture TAATAAATAT (5) 1.2 0.0012 P8 GC+SHH+1d culture TAATAAATTA (2) 1.2 0.0012 3T3 fibroblasts ACAGTGCCTG (5) 3.5 0.0035 3T3 fibroblasts AGTTTAAGGG (3) 3.5 0.0035 3T3 fibroblasts GCTCCCTCTG (3) 3.5 0.0035 3T3 fibroblasts GGGGGGGGGG (112) 3.5 0.0035 3T3 fibroblasts TTCTGTCCTA 3.5 0.0035 E15 cortex GCTCCCTCTG (3) 24.7 0.0247 E15 cortex ACCTTCCAAT 9.9 0.0099 E15 cortex ACAGTGCCTG (5) 4.9 0.0049 E15 cortex AGTTTAAGGG (3) 4.9 0.0049 E15 cortex GGGGGGGGGG (112) 4.9 0.0049 P1 cortex GCTCCCTCTG (3) 18.2 0.0182 P1 cortex ACAGTGCCTG (5) 4.5 0.0045 P1 cortex AGTTTAAGGG (3) 4.5 0.0045 P1 cortex CGGGAAATAC 4.5 0.0045 P1 cortex GAGAAAATAA (3) 4.5 0.0045 P1 cortex GAGCATACTT (4) 4.5 0.0045 P1 cortex TAATAAATTA (2) 4.5 0.0045 P1 cortex TTTCTAAAAA (7) 4.5 0.0045 Hypothalamus GCTCCCTCTG (3) 16.3 0.0163 Hypothalamus ACAGTGCCTG (5) 10.9 0.0109 Hypothalamus TTTTTCTACA (2) 5.4 0.0054 Hypothalamus TAAATTTGCT (2) 3.6 0.0036 Hypothalamus AAATGCTACC 1.8 0.0018 Hypothalamus CATTGCTAGT 1.8 0.0018 Hypothalamus GACTGGAATG (4) 1.8 0.0018 Hypothalamus GGGGGGGGGG (112) 1.8 0.0018 Hypothalamus TAATAAATTA (2) 1.8 0.0018 Hypothalamus TTTTCTCCTG (4) 1.8 0.0018 E12.5 retina GCTCCCTCTG (3) 22.5 0.0225 E12.5 retina ACAGTGCCTG (5) 13.1 0.0131 E12.5 retina AGTTTAAGGG (3) 3.8 0.0038 E12.5 retina CGGGAAATAC 3.8 0.0038 E12.5 retina GAGAAATAAT (2) 3.8 0.0038 E12.5 retina TTTCTAAAAA (7) 3.8 0.0038 E12.5 retina TTTCTAAAAG (2) 3.8 0.0038 E12.5 retina GCCTCGGTCT (2) 1.9 0.0019 E12.5 retina TTTAGTTTTT (2) 1.9 0.0019 E12.5 retina TTTTCTCCTG (4) 1.9 0.0019 E12.5 retina TTTTTATTTG (7) 1.9 0.0019 E14.5 retina GCTCCCTCTG (3) 18.2 0.0182 E14.5 retina ACAGTGCCTG (5) 10.9 0.0109 E14.5 retina TAAATTTGCT (2) 7.3 0.0073 E14.5 retina TTTCTAAAAA (7) 7.3 0.0073 E14.5 retina GAGAAATAAT (2) 3.6 0.0036 E14.5 retina TAATAAATAT (5) 3.6 0.0036 E14.5 retina TTCTGTCCTA 3.6 0.0036 E14.5 retina AAATGCTACC 1.8 0.0018 E14.5 retina ACCTTCCAAT 1.8 0.0018 E14.5 retina GAGAAAATAA (3) 1.8 0.0018 E14.5 retina GAGCTCACAT 1.8 0.0018 E14.5 retina TTTCTAAAAG (2) 1.8 0.0018 E16.5 retina GCTCCCTCTG (3) 25.4 0.0254 E16.5 retina ACAGTGCCTG (5) 10.9 0.0109 E16.5 retina GAGAAATAAT (2) 3.6 0.0036 E16.5 retina GAGCATACTT (4) 1.8 0.0018 E16.5 retina TAATAAATAT (5) 1.8 0.0018 E16.5 retina TTTAGTTTTT (2) 1.8 0.0018 E16.5 retina TTTTTATTTG (7) 1.8 0.0018 E18.5 retina GCTCCCTCTG (3) 20 0.02 E18.5 retina ACAGTGCCTG (5) 14.6 0.0146 E18.5 retina GAGAAATAAT (2) 5.5 0.0055 E18.5 retina AGTTTAAGGG (3) 3.6 0.0036 E18.5 retina GAGCTCACAT 3.6 0.0036 E18.5 retina GCCTCGGTCT (2) 3.6 0.0036 E18.5 retina TAAATTTGCT (2) 3.6 0.0036 E18.5 retina TTTCTAAAAA (7) 3.6 0.0036 E18.5 retina AAAAAAAAGG (6) 1.8 0.0018 E18.5 retina TAATAAATTA (2) 1.8 0.0018 E18.5 retina TTTCTAAAAG (2) 1.8 0.0018 E18.5 retina TTTTTCTACA (2) 1.8 0.0018 P0.5 retina GCTCCCTCTG (3) 13.7 0.0137 P0.5 retina ACAGTGCCTG (5) 9.8 0.0098 P0.5 retina AGTTTAAGGG (3) 7.9 0.0079 P0.5 retina TAAATTTGCT (2) 3.9 0.0039 P0.5 retina GAGAAATAAT (2) 2 0.002 P0.5 retina GAGCATACTT (4) 2 0.002 P0.5 retina TTCTGTCCTA 2 0.002 P0.5 retina TTTCTAAAAG (2) 2 0.002 P0.5 retina TTTTTCTACA (2) 2 0.002 P2.5 retina GCTCCCTCTG (3) 17.6 0.0176 P2.5 retina ACAGTGCCTG (5) 14.1 0.0141 P2.5 retina GGGGGGGGGG (112) 7 0.007 P2.5 retina AGTTTAAGGG (3) 5.3 0.0053 P2.5 retina GAGAAATAAT (2) 3.5 0.0035 P2.5 retina TTTCTAAAAA (7) 3.5 0.0035 P2.5 retina GCCTCGGTCT (2) 1.8 0.0018 P2.5 retina TAAATTTGCT (2) 1.8 0.0018 P2.5 retina TTTTTCTACA (2) 1.8 0.0018 P4.5 retina GCTCCCTCTG (3) 31.7 0.0317 P4.5 retina ACAGTGCCTG (5) 13.9 0.0139 P4.5 retina AGTTTAAGGG (3) 11.9 0.0119 P4.5 retina GGGGGGGGGG (112) 9.9 0.0099 P4.5 retina TTTCTAAAAA (7) 7.9 0.0079 P4.5 retina GAGAAATAAT (2) 4 0.004 P4.5 retina ACCTTCCAAT 2 0.002 P4.5 retina GAGAAAATAA (3) 2 0.002 P4.5 retina TTTCTAAAAG (2) 2 0.002 P4.5 retina TTTTTCTACA (2) 2 0.002 P6.5 retina GCTCCCTCTG (3) 28.3 0.0283 P6.5 retina ACAGTGCCTG (5) 16.7 0.0167 P6.5 retina AGTTTAAGGG (3) 11.7 0.0117 P6.5 retina ACCTTCCAAT 6.7 0.0067 P6.5 retina GAGCTCACAT 3.3 0.0033 P6.5 retina GGGGGGGGGG (112) 3.3 0.0033 P6.5 retina AAAAAAAAGG (6) 1.7 0.0017 P6.5 retina GAGAAAATAA (3) 1.7 0.0017 P6.5 retina GAGCATACTT (4) 1.7 0.0017 P6.5 retina TTCTGTCCTA 1.7 0.0017 P6.5 retina TTTAGTTTTT (2) 1.7 0.0017 P6.5 retina TTTCTAAAAA (7) 1.7 0.0017 P6.5 retina TTTTTATTTG (7) 1.7 0.0017 P10.5 crx- retina GCTCCCTCTG (3) 9.3 0.0093 P10.5 crx- retina ACAGTGCCTG (5) 7.4 0.0074 P10.5 crx- retina GAGCATACTT (4) 3.7 0.0037 P10.5 crx- retina AGTTTAAGGG (3) 1.9 0.0019 P10.5 crx- retina GACAGAAACA (5) 1.9 0.0019 P10.5 crx- retina GACTGGAATG (4) 1.9 0.0019 P10.5 crx- retina GAGAAAATAA (3) 1.9 0.0019 P10.5 crx- retina TTCTGTCCTA 1.9 0.0019 P10.5 crx- retina TTTTTCTACA (2) 1.9 0.0019 P10.5 crx+ retina ACAGTGCCTG (5) 21.1 0.0211 P10.5 crx+ retina GCTCCCTCTG (3) 17.3 0.0173 P10.5 crx+ retina AGTTTAAGGG (3) 9.6 0.0096 P10.5 crx+ retina GGGGGGGGGG (112) 9.6 0.0096 P10.5 crx+ retina AAATGCTACC 1.9 0.0019 P10.5 crx+ retina CATTGCTAGT 1.9 0.0019 P10.5 crx+ retina GACAGAAACA (5) 1.9 0.0019 P10.5 crx+ retina GAGAAAATAA (3) 1.9 0.0019 P10.5 crx+ retina GAGAAATAAT (2) 1.9 0.0019 P10.5 crx+ retina GAGCATACTT (4) 1.9 0.0019 P10.5 crx+ retina GAGCTCACAT 1.9 0.0019 P10.5 crx+ retina TAATAAATAT (5) 1.9 0.0019 Adult retinal GAGCATACTT (4) 3.7 0.0037 Adult retinal GCTCCCTCTG (3) 3.7 0.0037 Adult retinal GGGGGGGGGG (112) 3.7 0.0037 Adult retinal ACAGTGCCTG (5) 1.9 0.0019 Adult retinal AGTTTAAGGG (3) 1.9 0.0019 Adult retinal GACTGGAATG (4) 1.9 0.0019 Adult retinal GAGAAATAAT (2) 1.9 0.0019 Adult retinal TTTCTAAAAA (7) 1.9 0.0019 ONL TAAATGCTCT (9) 7.7 0.0077 ONL AGTTTAAGGG (3) 3.8 0.0038 ONL GCTCCCTCTG (3) 3.8 0.0038 ONL ACAGTGCCTG (5) 1.9 0.0019 ONL ACCTTCCAAT 1.9 0.0019 ONL GACAGAAACA (5) 1.9 0.0019 ONL GACTGGAATG (4) 1.9 0.0019 ONL GAGCATACTT (4) 1.9 0.0019 ONL GGGGGGGGGG (112) 1.9 0.0019 ONL TAAATTTGCT (2) 1.9 0.0019 ONL TTTCTAAAAG (2) 1.9 0.0019 ONL TTTTCTCCTG (4) 1.9 0.0019