Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.257498
Utx
ubiquitously transcribed tetratricopeptide repeat gene, X chromosome
X
X 5.5 cM
22289
Mm.257498
DXErtd770e
DNA segment, Chr X, ERATO Doi 770, expressed
X
X 5.5 cM
52149
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 84 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GTAGCTCACA (
30
)
16.3
0.0163
P8 Cb GC
GTGGCACACA (
30
)
6.5
0.0065
P8 Cb GC
TACATAAAAT (
14
)
1.6
0.0016
Cb medulloblastoma
GTAGCTCACA (
30
)
18.5
0.0185
Cb medulloblastoma
GTGGCACACA (
30
)
11.6
0.0116
Cb medulloblastoma
TGAAATAATT
(
4
)
2.3
0.0023
P8 GC+1d culture
GTAGCTCACA (
30
)
27.4
0.0274
P8 GC+1d culture
GTGGCACACA (
30
)
13.7
0.0137
P8 GC+1d culture
CTGCAGCCTG
(
5
)
3.4
0.0034
P8 GC+1d culture
TACATAAAAT (
14
)
2.3
0.0023
P8 GC+1d culture
TGAAATAATT
(
4
)
1.1
0.0011
P8 GC+SHH+1d culture
GTAGCTCACA (
30
)
15.2
0.0152
P8 GC+SHH+1d culture
TGAAATAATT
(
4
)
4.7
0.0047
P8 GC+SHH+1d culture
TACATAAAAT (
14
)
3.5
0.0035
P8 GC+SHH+1d culture
CTGCAGCCTG
(
5
)
2.3
0.0023
P8 GC+SHH+1d culture
GTGGCACACA (
30
)
2.3
0.0023
3T3 fibroblasts
GTAGCTCACA (
30
)
14
0.014
3T3 fibroblasts
GTGGCACACA (
30
)
14
0.014
3T3 fibroblasts
TACATAAAAT (
14
)
3.5
0.0035
E15 cortex
GTAGCTCACA (
30
)
29.7
0.0297
E15 cortex
GTGGCACACA (
30
)
24.7
0.0247
E15 cortex
AAGTTCCAGG (
6
)
4.9
0.0049
E15 cortex
TACATAAAAT (
14
)
4.9
0.0049
P1 cortex
GTAGCTCACA (
30
)
13.6
0.0136
P1 cortex
CTGCAGCCTG
(
5
)
4.5
0.0045
P1 cortex
GTGGCACACA (
30
)
4.5
0.0045
P1 cortex
TGAAATAATT
(
4
)
4.5
0.0045
Hypothalamus
GTAGCTCACA (
30
)
29
0.029
Hypothalamus
GTGGCACACA (
30
)
7.2
0.0072
Hypothalamus
TGAAATAATT
(
4
)
5.4
0.0054
Hypothalamus
AGACCTTTTC
(
3
)
1.8
0.0018
Hypothalamus
TACATAAAAT (
14
)
1.8
0.0018
E12.5 retina
GTAGCTCACA (
30
)
30
0.03
E12.5 retina
GTGGCACACA (
30
)
11.3
0.0113
E12.5 retina
AGACCTTTTC
(
3
)
3.8
0.0038
E12.5 retina
TACATAAAAT (
14
)
3.8
0.0038
E14.5 retina
GTAGCTCACA (
30
)
31
0.031
E14.5 retina
GTGGCACACA (
30
)
18.2
0.0182
E14.5 retina
TACATAAAAT (
14
)
7.3
0.0073
E14.5 retina
AATTTATTTT (
9
)
1.8
0.0018
E14.5 retina
TGAAATAATT
(
4
)
1.8
0.0018
E16.5 retina
GTAGCTCACA (
30
)
41.7
0.0417
E16.5 retina
GTGGCACACA (
30
)
9.1
0.0091
E16.5 retina
TGAAATAATT
(
4
)
5.4
0.0054
E16.5 retina
CTGCAGCCTG
(
5
)
3.6
0.0036
E16.5 retina
TACATAAAAT (
14
)
3.6
0.0036
E18.5 retina
GTAGCTCACA (
30
)
16.4
0.0164
E18.5 retina
TACATAAAAT (
14
)
12.7
0.0127
E18.5 retina
GTGGCACACA (
30
)
5.5
0.0055
E18.5 retina
TGAAATAATT
(
4
)
5.5
0.0055
E18.5 retina
CTGCAGCCTG
(
5
)
3.6
0.0036
E18.5 retina
AATTTATTTT (
9
)
1.8
0.0018
P0.5 retina
GTAGCTCACA (
30
)
25.5
0.0255
P0.5 retina
GTGGCACACA (
30
)
11.8
0.0118
P0.5 retina
AAGTTCCAGG (
6
)
2
0.002
P0.5 retina
CTGCAGCCTG
(
5
)
2
0.002
P2.5 retina
GTAGCTCACA (
30
)
22.9
0.0229
P2.5 retina
GTGGCACACA (
30
)
17.6
0.0176
P2.5 retina
TACATAAAAT (
14
)
3.5
0.0035
P2.5 retina
AAGTTCCAGG (
6
)
1.8
0.0018
P2.5 retina
TGAAATAATT
(
4
)
1.8
0.0018
P4.5 retina
GTAGCTCACA (
30
)
25.8
0.0258
P4.5 retina
GTGGCACACA (
30
)
11.9
0.0119
P4.5 retina
TACATAAAAT (
14
)
7.9
0.0079
P6.5 retina
GTGGCACACA (
30
)
26.7
0.0267
P6.5 retina
GTAGCTCACA (
30
)
18.3
0.0183
P6.5 retina
AGACCTTTTC
(
3
)
1.7
0.0017
P6.5 retina
TACATAAAAT (
14
)
1.7
0.0017
P6.5 retina
TGAAATAATT
(
4
)
1.7
0.0017
P10.5 crx- retina
GTAGCTCACA (
30
)
16.7
0.0167
P10.5 crx- retina
GTGGCACACA (
30
)
13
0.013
P10.5 crx- retina
TACATAAAAT (
14
)
3.7
0.0037
P10.5 crx- retina
AATTTATTTT (
9
)
1.9
0.0019
P10.5 crx+ retina
GTAGCTCACA (
30
)
28.8
0.0288
P10.5 crx+ retina
GTGGCACACA (
30
)
7.7
0.0077
P10.5 crx+ retina
TACATAAAAT (
14
)
5.8
0.0058
Adult retinal
GTAGCTCACA (
30
)
16.7
0.0167
Adult retinal
GTGGCACACA (
30
)
5.6
0.0056
Adult retinal
TGAAATAATT
(
4
)
5.6
0.0056
Adult retinal
CTGCAGCCTG
(
5
)
1.9
0.0019
ONL
GTAGCTCACA (
30
)
24.9
0.0249
ONL
GTGGCACACA (
30
)
24.9
0.0249
ONL
TGAAATAATT
(
4
)
3.8
0.0038
ONL
TACATAAAAT (
14
)
1.9
0.0019
