Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.257925	Hipk3	homeodomain interacting protein kinase 3	2		15259
Gene Ontology	ATP binding | cytoplasm | kinase activity | nucleus | protein amino acid phosphorylation | protein kinase activity | protein serine/threonine kinase activity | protein-tyrosine kinase activity | transferase activity
Human Homolog	HIPK3[homeodomain interacting protein kinase 3]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 65 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCAAAAAAAA (50) 14.7 0.0147 P8 Cb GC TTTTTATTTT (14) 13.1 0.0131 P8 Cb GC GTATTTAATA (2) 4.9 0.0049 P8 Cb GC GCAAACTAGT (2) 1.6 0.0016 Cb medulloblastoma GCAAAAAAAA (50) 60.1 0.0601 Cb medulloblastoma GTATTTAATA (2) 4.6 0.0046 Cb medulloblastoma TTTTTATTTT (14) 4.6 0.0046 P8 GC+1d culture GCAAAAAAAA (50) 12.6 0.0126 P8 GC+1d culture TTTTTATTTT (14) 9.1 0.0091 P8 GC+1d culture GTATTTAATA (2) 4.6 0.0046 P8 GC+1d culture GCAAACTAGT (2) 2.3 0.0023 P8 GC+SHH+1d culture GCAAAAAAAA (50) 29.3 0.0293 P8 GC+SHH+1d culture TTTTTATTTT (14) 10.5 0.0105 P8 GC+SHH+1d culture GTATTTAATA (2) 2.3 0.0023 3T3 fibroblasts GCAAAAAAAA (50) 3.5 0.0035 3T3 fibroblasts GCAAACTAGT (2) 3.5 0.0035 3T3 fibroblasts GTATTTAATA (2) 3.5 0.0035 E15 cortex GCAAAAAAAA (50) 9.9 0.0099 P1 cortex GCAAAAAAAA (50) 4.5 0.0045 P1 cortex GTATTTAATA (2) 4.5 0.0045 Hypothalamus GCAAAAAAAA (50) 19.9 0.0199 Hypothalamus TTTTTATTTT (14) 5.4 0.0054 Hypothalamus GTATTTAATA (2) 1.8 0.0018 Hypothalamus TGAGAAGGTT (5) 1.8 0.0018 E12.5 retina GCAAAAAAAA (50) 9.4 0.0094 E12.5 retina GTATTTAATA (2) 1.9 0.0019 E12.5 retina TTTTTATTTT (14) 1.9 0.0019 E14.5 retina GCAAAAAAAA (50) 12.8 0.0128 E14.5 retina GTATTTAATA (2) 9.1 0.0091 E14.5 retina TTTTTATTTT (14) 1.8 0.0018 E16.5 retina GCAAAAAAAA (50) 10.9 0.0109 E16.5 retina GTATTTAATA (2) 7.2 0.0072 E16.5 retina TTTTTATTTT (14) 3.6 0.0036 E18.5 retina GCAAAAAAAA (50) 25.5 0.0255 E18.5 retina GTATTTAATA (2) 3.6 0.0036 E18.5 retina TTTTTATTTT (14) 3.6 0.0036 P0.5 retina GCAAAAAAAA (50) 17.7 0.0177 P0.5 retina GCAAACTAGT (2) 2 0.002 P0.5 retina TTTTTATTTT (14) 2 0.002 P2.5 retina GCAAAAAAAA (50) 22.9 0.0229 P2.5 retina GTATTTAATA (2) 5.3 0.0053 P2.5 retina TTTTTATTTT (14) 5.3 0.0053 P4.5 retina GCAAAAAAAA (50) 25.8 0.0258 P4.5 retina GTATTTAATA (2) 9.9 0.0099 P4.5 retina TTTTTATTTT (14) 4 0.004 P6.5 retina GCAAAAAAAA (50) 11.7 0.0117 P6.5 retina GTATTTAATA (2) 6.7 0.0067 P6.5 retina GCAAACTAGT (2) 5 0.005 P6.5 retina TTTTTATTTT (14) 5 0.005 P10.5 crx- retina GCAAAAAAAA (50) 5.6 0.0056 P10.5 crx- retina GCAAACTAGT (2) 5.6 0.0056 P10.5 crx- retina GTATTTAATA (2) 5.6 0.0056 P10.5 crx- retina TTTTTATTTT (14) 3.7 0.0037 P10.5 crx+ retina TTTTTATTTT (14) 5.8 0.0058 P10.5 crx+ retina GTATTTAATA (2) 3.8 0.0038 P10.5 crx+ retina GCAAAAAAAA (50) 1.9 0.0019 P10.5 crx+ retina GCAAACTAGT (2) 1.9 0.0019 P10.5 crx+ retina TGAGAAGGTT (5) 1.9 0.0019 Adult retinal GCAAAAAAAA (50) 11.1 0.0111 Adult retinal TTTTTATTTT (14) 3.7 0.0037 ONL GTATTTAATA (2) 13.4 0.0134 ONL GCAAAAAAAA (50) 1.9 0.0019 ONL GCAAACTAGT (2) 1.9 0.0019 ONL TGAGAAGGTT (5) 1.9 0.0019 ONL TTTTTATTTT (14) 1.9 0.0019