Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.259180
1110054A01Rik
RIKEN cDNA 1110054A01 gene
19
68835
Mm.259180
0610009F02Rik
RIKEN cDNA 0610009F02 gene
19
76073
Mm.259180
9530023M17Rik
RIKEN cDNA 9530023M17 gene
19
109322
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 62 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TTTGTGTTTT (
7
)
6.5
0.0065
P8 Cb GC
TTGGAAATAG
(
3
)
1.6
0.0016
P8 Cb GC
TTTTAGAACT (
9
)
1.6
0.0016
Cb medulloblastoma
GATAAAAAAA (
9
)
18.5
0.0185
Cb medulloblastoma
TTTGTGTTTT (
7
)
11.6
0.0116
Cb medulloblastoma
TTGGAAATAG
(
3
)
4.6
0.0046
Cb medulloblastoma
AAAAGCCTTT (
6
)
2.3
0.0023
Cb medulloblastoma
GTCAAATATA
(
3
)
2.3
0.0023
Cb medulloblastoma
TTTTAGAACT (
9
)
2.3
0.0023
P8 GC+1d culture
TTTGTGTTTT (
7
)
12.6
0.0126
P8 GC+1d culture
AAAAGCCTTT (
6
)
2.3
0.0023
P8 GC+1d culture
GATAAAAAAA (
9
)
2.3
0.0023
P8 GC+1d culture
TTTTAGAACT (
9
)
1.1
0.0011
P8 GC+SHH+1d culture
TTTGTGTTTT (
7
)
19.9
0.0199
P8 GC+SHH+1d culture
GATAAAAAAA (
9
)
11.7
0.0117
P8 GC+SHH+1d culture
TTTTAGAACT (
9
)
2.3
0.0023
P8 GC+SHH+1d culture
AAAAGCCTTT (
6
)
1.2
0.0012
3T3 fibroblasts
TTTGTGTTTT (
7
)
3.5
0.0035
P1 cortex
AAAAGCCTTT (
6
)
9.1
0.0091
P1 cortex
TTTGTGTTTT (
7
)
4.5
0.0045
Hypothalamus
TTTGTGTTTT (
7
)
7.2
0.0072
Hypothalamus
GATAAAAAAA (
9
)
3.6
0.0036
Hypothalamus
TTGGAAATAG
(
3
)
3.6
0.0036
Hypothalamus
TTTTAGAACT (
9
)
1.8
0.0018
E12.5 retina
TTTGTGTTTT (
7
)
11.3
0.0113
E12.5 retina
AAAAGCCTTT (
6
)
3.8
0.0038
E12.5 retina
GATAAAAAAA (
9
)
3.8
0.0038
E14.5 retina
TTTGTGTTTT (
7
)
16.4
0.0164
E14.5 retina
GATAAAAAAA (
9
)
3.6
0.0036
E14.5 retina
TTGGAAATAG
(
3
)
3.6
0.0036
E16.5 retina
TTTGTGTTTT (
7
)
16.3
0.0163
E16.5 retina
TTTTAGAACT (
9
)
3.6
0.0036
E18.5 retina
TTTGTGTTTT (
7
)
29.1
0.0291
E18.5 retina
GATAAAAAAA (
9
)
12.7
0.0127
E18.5 retina
TTGGAAATAG
(
3
)
3.6
0.0036
E18.5 retina
AAAAGCCTTT (
6
)
1.8
0.0018
P0.5 retina
TTTGTGTTTT (
7
)
17.7
0.0177
P0.5 retina
TTTTAGAACT (
9
)
3.9
0.0039
P0.5 retina
GATAAAAAAA (
9
)
2
0.002
P2.5 retina
GATAAAAAAA (
9
)
8.8
0.0088
P2.5 retina
TTTGTGTTTT (
7
)
8.8
0.0088
P2.5 retina
AAAAGCCTTT (
6
)
1.8
0.0018
P2.5 retina
GTCAAATATA
(
3
)
1.8
0.0018
P2.5 retina
TTTTAGAACT (
9
)
1.8
0.0018
P4.5 retina
TTTGTGTTTT (
7
)
23.8
0.0238
P4.5 retina
GATAAAAAAA (
9
)
13.9
0.0139
P4.5 retina
GTCAAATATA
(
3
)
2
0.002
P4.5 retina
TTGGAAATAG
(
3
)
2
0.002
P4.5 retina
TTTTAGAACT (
9
)
2
0.002
P6.5 retina
TTTGTGTTTT (
7
)
5
0.005
P6.5 retina
GATAAAAAAA (
9
)
3.3
0.0033
P6.5 retina
TTGGAAATAG
(
3
)
3.3
0.0033
P6.5 retina
AAAAGCCTTT (
6
)
1.7
0.0017
P6.5 retina
TTTTAGAACT (
9
)
1.7
0.0017
P10.5 crx- retina
TTTGTGTTTT (
7
)
14.9
0.0149
P10.5 crx+ retina
TTTGTGTTTT (
7
)
17.3
0.0173
P10.5 crx+ retina
GATAAAAAAA (
9
)
7.7
0.0077
P10.5 crx+ retina
TTTTAGAACT (
9
)
1.9
0.0019
ONL
TTTGTGTTTT (
7
)
7.7
0.0077
ONL
TTGGAAATAG
(
3
)
3.8
0.0038
ONL
GATAAAAAAA (
9
)
1.9
0.0019
ONL
GTCAAATATA
(
3
)
1.9
0.0019
