Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.259634
1110033K02Rik
RIKEN cDNA 1110033K02 gene
7
381921
Mm.259634
B230344N16
hypothetical protein B230344N16
7
330654
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
Total 7 In Situ Hybridization Images
Images -- Click to Enlarge
SAGE Tags
Total 64 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GGAGCCCCTC
(
6
)
9.8
0.0098
P8 Cb GC
GTGGCACACA (
30
)
6.5
0.0065
P8 Cb GC
GGGGTTTTCC
(
7
)
1.6
0.0016
Cb medulloblastoma
GTGGCACACA (
30
)
11.6
0.0116
Cb medulloblastoma
GGAGCCCCTC
(
6
)
9.2
0.0092
Cb medulloblastoma
GGGGTTTTCC
(
7
)
2.3
0.0023
P8 GC+1d culture
GTGGCACACA (
30
)
13.7
0.0137
P8 GC+1d culture
GGGGTTTTCC
(
7
)
5.7
0.0057
P8 GC+1d culture
GGAGCCCCTC
(
6
)
4.6
0.0046
P8 GC+1d culture
ATGGCCCCAG
(
4
)
1.1
0.0011
P8 GC+SHH+1d culture
GGAGCCCCTC
(
6
)
2.3
0.0023
P8 GC+SHH+1d culture
GGGGTTTTCC
(
7
)
2.3
0.0023
P8 GC+SHH+1d culture
GTGGCACACA (
30
)
2.3
0.0023
3T3 fibroblasts
GTGGCACACA (
30
)
14
0.014
E15 cortex
GTGGCACACA (
30
)
24.7
0.0247
E15 cortex
GGAGCCCCTC
(
6
)
9.9
0.0099
E15 cortex
GGGGTTTTCC
(
7
)
4.9
0.0049
P1 cortex
GGAGCCCCTC
(
6
)
9.1
0.0091
P1 cortex
GTGGCACACA (
30
)
4.5
0.0045
Hypothalamus
GTGGCACACA (
30
)
7.2
0.0072
Hypothalamus
GGGGTTTTCC
(
7
)
1.8
0.0018
E12.5 retina
GTGGCACACA (
30
)
11.3
0.0113
E12.5 retina
GGAGCCCCTC
(
6
)
5.6
0.0056
E12.5 retina
ATGGCCCCAG
(
4
)
3.8
0.0038
E12.5 retina
GGGGTTTTCC
(
7
)
1.9
0.0019
E14.5 retina
GTGGCACACA (
30
)
18.2
0.0182
E14.5 retina
GGGGTTTTCC
(
7
)
5.5
0.0055
E14.5 retina
GGAGCCCCTC
(
6
)
3.6
0.0036
E16.5 retina
GTGGCACACA (
30
)
9.1
0.0091
E16.5 retina
GGAGCCCCTC
(
6
)
3.6
0.0036
E16.5 retina
ATGGCCCCAG
(
4
)
1.8
0.0018
E16.5 retina
GGGGTTTTCC
(
7
)
1.8
0.0018
E16.5 retina
TTTTCTGTTT (
10
)
1.8
0.0018
E18.5 retina
GGAGCCCCTC
(
6
)
5.5
0.0055
E18.5 retina
GTGGCACACA (
30
)
5.5
0.0055
E18.5 retina
GGGGTTTTCC
(
7
)
3.6
0.0036
P0.5 retina
GTGGCACACA (
30
)
11.8
0.0118
P0.5 retina
GGAGCCCCTC
(
6
)
7.9
0.0079
P2.5 retina
GTGGCACACA (
30
)
17.6
0.0176
P2.5 retina
GGGGTTTTCC
(
7
)
10.6
0.0106
P2.5 retina
GGAGCCCCTC
(
6
)
7
0.007
P4.5 retina
GTGGCACACA (
30
)
11.9
0.0119
P4.5 retina
GGAGCCCCTC
(
6
)
9.9
0.0099
P4.5 retina
ATGGCCCCAG
(
4
)
2
0.002
P4.5 retina
GGGGTTTTCC
(
7
)
2
0.002
P6.5 retina
GTGGCACACA (
30
)
26.7
0.0267
P6.5 retina
GGAGCCCCTC
(
6
)
3.3
0.0033
P6.5 retina
GGGGTTTTCC
(
7
)
1.7
0.0017
P6.5 retina
TTTTCTGTTT (
10
)
1.7
0.0017
P10.5 crx- retina
GTGGCACACA (
30
)
13
0.013
P10.5 crx- retina
GGAGCCCCTC
(
6
)
7.4
0.0074
P10.5 crx- retina
GGGGTTTTCC
(
7
)
1.9
0.0019
P10.5 crx- retina
TTTTCTGTTT (
10
)
1.9
0.0019
P10.5 crx+ retina
GGAGCCCCTC
(
6
)
11.5
0.0115
P10.5 crx+ retina
GTGGCACACA (
30
)
7.7
0.0077
P10.5 crx+ retina
GGGGTTTTCC
(
7
)
1.9
0.0019
P10.5 crx+ retina
TTTTCTGTTT (
10
)
1.9
0.0019
Adult retinal
GGAGCCCCTC
(
6
)
5.6
0.0056
Adult retinal
GTGGCACACA (
30
)
5.6
0.0056
Adult retinal
GGGGTTTTCC
(
7
)
1.9
0.0019
Adult retinal
TTTTCTGTTT (
10
)
1.9
0.0019
ONL
GTGGCACACA (
30
)
24.9
0.0249
ONL
GGAGCCCCTC
(
6
)
5.7
0.0057
ONL
GGGGTTTTCC
(
7
)
3.8
0.0038
