Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.260159
2310061I04Rik
RIKEN cDNA 2310061I04 gene
17
69662
Human Homolog
C6orf136[chromosome 6 open reading frame 136]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 57 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GACAAAAAAA (
15
)
6.5
0.0065
P8 Cb GC
AACAAAAAAA (
18
)
4.9
0.0049
P8 Cb GC
CTGGGTAAAG
(
3
)
1.6
0.0016
Cb medulloblastoma
GACAAAAAAA (
15
)
11.6
0.0116
Cb medulloblastoma
AACAAAAAAA (
18
)
9.2
0.0092
Cb medulloblastoma
CTGGGTAAAG
(
3
)
9.2
0.0092
Cb medulloblastoma
GAGCAGTAAA (
3
)
2.3
0.0023
P8 GC+1d culture
GACAAAAAAA (
15
)
9.1
0.0091
P8 GC+1d culture
CTGGGTAAAG
(
3
)
4.6
0.0046
P8 GC+1d culture
AACAAAAAAA (
18
)
3.4
0.0034
P8 GC+SHH+1d culture
CTGGGTAAAG
(
3
)
7
0.007
P8 GC+SHH+1d culture
AACAAAAAAA (
18
)
5.9
0.0059
P8 GC+SHH+1d culture
GACAAAAAAA (
15
)
5.9
0.0059
E15 cortex
AACAAAAAAA (
18
)
4.9
0.0049
P1 cortex
CTGGGTAAAG
(
3
)
4.5
0.0045
P1 cortex
GACAAAAAAA (
15
)
4.5
0.0045
Hypothalamus
CTGGGTAAAG
(
3
)
23.5
0.0235
Hypothalamus
GACAAAAAAA (
15
)
3.6
0.0036
Hypothalamus
AACAAAAAAA (
18
)
1.8
0.0018
Hypothalamus
ATGGAAAGAA
(
12
)
1.8
0.0018
Hypothalamus
GGATGTGGCA (
2
)
1.8
0.0018
E12.5 retina
AACAAAAAAA (
18
)
3.8
0.0038
E12.5 retina
CTGGGTAAAG
(
3
)
3.8
0.0038
E12.5 retina
GACAAAAAAA (
15
)
1.9
0.0019
E14.5 retina
AACAAAAAAA (
18
)
1.8
0.0018
E14.5 retina
ATGGAAAGAA
(
12
)
1.8
0.0018
E14.5 retina
CTGGGTAAAG
(
3
)
1.8
0.0018
E14.5 retina
GACAAAAAAA (
15
)
1.8
0.0018
E16.5 retina
CTGGGTAAAG
(
3
)
7.2
0.0072
E18.5 retina
AACAAAAAAA (
18
)
5.5
0.0055
E18.5 retina
CTGGGTAAAG
(
3
)
5.5
0.0055
E18.5 retina
GACAAAAAAA (
15
)
1.8
0.0018
P0.5 retina
CTGGGTAAAG
(
3
)
3.9
0.0039
P0.5 retina
AACAAAAAAA (
18
)
2
0.002
P0.5 retina
ATGGAAAGAA
(
12
)
2
0.002
P2.5 retina
CTGGGTAAAG
(
3
)
12.3
0.0123
P2.5 retina
AACAAAAAAA (
18
)
3.5
0.0035
P2.5 retina
GAGCAGTAAA (
3
)
3.5
0.0035
P4.5 retina
CTGGGTAAAG
(
3
)
13.9
0.0139
P4.5 retina
AACAAAAAAA (
18
)
4
0.004
P4.5 retina
GACAAAAAAA (
15
)
2
0.002
P6.5 retina
CTGGGTAAAG
(
3
)
13.3
0.0133
P6.5 retina
ATGGAAAGAA
(
12
)
1.7
0.0017
P6.5 retina
GACAAAAAAA (
15
)
1.7
0.0017
P6.5 retina
GGATGTGGCA (
2
)
1.7
0.0017
P10.5 crx- retina
CTGGGTAAAG
(
3
)
11.1
0.0111
P10.5 crx- retina
AACAAAAAAA (
18
)
3.7
0.0037
P10.5 crx- retina
GGATGTGGCA (
2
)
3.7
0.0037
P10.5 crx+ retina
CTGGGTAAAG
(
3
)
7.7
0.0077
P10.5 crx+ retina
GACAAAAAAA (
15
)
3.8
0.0038
P10.5 crx+ retina
AACAAAAAAA (
18
)
1.9
0.0019
Adult retinal
CTGGGTAAAG
(
3
)
11.1
0.0111
Adult retinal
GACAAAAAAA (
15
)
1.9
0.0019
Adult retinal
GGATGTGGCA (
2
)
1.9
0.0019
ONL
CTGGGTAAAG
(
3
)
5.7
0.0057
ONL
GACAAAAAAA (
15
)
3.8
0.0038
ONL
GAGCAGTAAA (
3
)
1.9
0.0019
