Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.260256	AI428301	expressed sequence AI428301	16		106201
Mm.260256	Eif4g1	eukaryotic translation initiation factor 4, gamma 1	16		208643
Gene Ontology	cytoplasm | translation initiation factor activity
Human Homolog	EIF4G1[eukaryotic translation initiation factor 4 gamma, 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 107 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCCTCCAAGG (14) 78.3 0.0783 P8 Cb GC AATTCAATTA (4) 9.8 0.0098 P8 Cb GC GTGCCAACAG (4) 9.8 0.0098 P8 Cb GC AACAACTGGC (3) 3.3 0.0033 P8 Cb GC ATGAGGAGTC (3) 3.3 0.0033 P8 Cb GC TTTAATAATT (2) 3.3 0.0033 P8 Cb GC GACACGTGGA (2) 1.6 0.0016 P8 Cb GC TGACTGAGAA (3) 1.6 0.0016 P8 Cb GC TGGGGATAAG (4) 1.6 0.0016 Cb medulloblastoma GCCTCCAAGG (14) 120.2 0.1202 Cb medulloblastoma AATTCAATTA (4) 16.2 0.0162 Cb medulloblastoma GTGCCAACAG (4) 6.9 0.0069 Cb medulloblastoma AACAACTGGC (3) 2.3 0.0023 Cb medulloblastoma AAGGAGGGCA (6) 2.3 0.0023 Cb medulloblastoma ACAACTGTCT (3) 2.3 0.0023 Cb medulloblastoma ATGAGGAGTC (3) 2.3 0.0023 P8 GC+1d culture GCCTCCAAGG (14) 99.3 0.0993 P8 GC+1d culture AATTCAATTA (4) 10.3 0.0103 P8 GC+1d culture GTGCCAACAG (4) 3.4 0.0034 P8 GC+1d culture GGCAAAGCTA (5) 2.3 0.0023 P8 GC+1d culture ACAACTGTCT (3) 1.1 0.0011 P8 GC+1d culture GACACGTGGA (2) 1.1 0.0011 P8 GC+SHH+1d culture GCCTCCAAGG (14) 146.4 0.1464 P8 GC+SHH+1d culture AATTCAATTA (4) 23.4 0.0234 P8 GC+SHH+1d culture GTGCCAACAG (4) 3.5 0.0035 P8 GC+SHH+1d culture AAACAAACAA (2) 1.2 0.0012 P8 GC+SHH+1d culture GTGCCACACA (4) 1.2 0.0012 3T3 fibroblasts GCCTCCAAGG (14) 452.1 0.4521 3T3 fibroblasts ATGAGGAGTC (3) 3.5 0.0035 E15 cortex GCCTCCAAGG (14) 133.6 0.1336 E15 cortex ATGAGGAGTC (3) 4.9 0.0049 E15 cortex GACACGTGGA (2) 4.9 0.0049 P1 cortex GCCTCCAAGG (14) 122.7 0.1227 P1 cortex AATTCAATTA (4) 9.1 0.0091 P1 cortex TTTAATAATT (2) 4.5 0.0045 Hypothalamus GCCTCCAAGG (14) 74.3 0.0743 Hypothalamus AATTCAATTA (4) 3.6 0.0036 Hypothalamus GTGCCAACAG (4) 3.6 0.0036 Hypothalamus AGCCAAGCAC (5) 1.8 0.0018 Hypothalamus GACACGTGGA (2) 1.8 0.0018 Hypothalamus GGCCAAAGGG (6) 1.8 0.0018 E12.5 retina GCCTCCAAGG (14) 236.5 0.2365 E12.5 retina AATTCAATTA (4) 30 0.03 E12.5 retina AGCCAAGCAC (5) 1.9 0.0019 E12.5 retina TGGGGATAAG (4) 1.9 0.0019 E14.5 retina GCCTCCAAGG (14) 40.1 0.0401 E14.5 retina AATTCAATTA (4) 25.5 0.0255 E14.5 retina AACAACTGGC (3) 3.6 0.0036 E14.5 retina TGGGGATAAG (4) 1.8 0.0018 E14.5 retina TTTAATAATT (2) 1.8 0.0018 E16.5 retina GCCTCCAAGG (14) 83.3 0.0833 E16.5 retina AATTCAATTA (4) 10.9 0.0109 E16.5 retina GGTCCCAAAA (10) 3.6 0.0036 E16.5 retina GGCAAAGCTA (5) 1.8 0.0018 E16.5 retina GTGCCAACAG (4) 1.8 0.0018 E16.5 retina GTGCCACACA (4) 1.8 0.0018 E18.5 retina GCCTCCAAGG (14) 105.5 0.1055 E18.5 retina AATTCAATTA (4) 30.9 0.0309 E18.5 retina TATGGCTTTA (3) 1.8 0.0018 P0.5 retina GCCTCCAAGG (14) 239.4 0.2394 P0.5 retina AATTCAATTA (4) 13.7 0.0137 P0.5 retina AAACAAACAA (2) 2 0.002 P0.5 retina AGCCAAGCAC (5) 2 0.002 P2.5 retina GCCTCCAAGG (14) 176 0.176 P2.5 retina AATTCAATTA (4) 8.8 0.0088 P2.5 retina AACAACTGGC (3) 5.3 0.0053 P2.5 retina GGCCAAAGGG (6) 5.3 0.0053 P2.5 retina AAACAAACAA (2) 1.8 0.0018 P2.5 retina GACACGTGGA (2) 1.8 0.0018 P2.5 retina TGCCCATCTG (2) 1.8 0.0018 P4.5 retina GCCTCCAAGG (14) 91.1 0.0911 P4.5 retina AATTCAATTA (4) 15.9 0.0159 P4.5 retina AACAACTGGC (3) 2 0.002 P4.5 retina GGTCCCAAAA (10) 2 0.002 P4.5 retina GTGCCAACAG (4) 2 0.002 P4.5 retina TGACTGAGAA (3) 2 0.002 P4.5 retina TGCCCATCTG (2) 2 0.002 P4.5 retina TTTAATAATT (2) 2 0.002 P6.5 retina GCCTCCAAGG (14) 153.4 0.1534 P6.5 retina AATTCAATTA (4) 13.3 0.0133 P6.5 retina GTGCCAACAG (4) 3.3 0.0033 P6.5 retina TATGGCTTTA (3) 3.3 0.0033 P6.5 retina TGACTGAGAA (3) 3.3 0.0033 P6.5 retina AACAACTGGC (3) 1.7 0.0017 P10.5 crx- retina GCCTCCAAGG (14) 341.8 0.3418 P10.5 crx- retina AATTCAATTA (4) 14.9 0.0149 P10.5 crx- retina GTGCCAACAG (4) 9.3 0.0093 P10.5 crx- retina AAGGAGGGCA (6) 1.9 0.0019 P10.5 crx+ retina GCCTCCAAGG (14) 265.3 0.2653 P10.5 crx+ retina GTGCCACACA (4) 3.8 0.0038 P10.5 crx+ retina AACAACTGGC (3) 1.9 0.0019 P10.5 crx+ retina AATTCAATTA (4) 1.9 0.0019 P10.5 crx+ retina TATGGCTTTA (3) 1.9 0.0019 P10.5 crx+ retina TGCCCATCTG (2) 1.9 0.0019 Adult retinal GCCTCCAAGG (14) 327.7 0.3277 Adult retinal AATTCAATTA (4) 5.6 0.0056 Adult retinal GTGCCAACAG (4) 3.7 0.0037 Adult retinal AACAACTGGC (3) 1.9 0.0019 Adult retinal GGCAAAGCTA (5) 1.9 0.0019 Adult retinal TGGGGATAAG (4) 1.9 0.0019 ONL GCCTCCAAGG (14) 352.4 0.3524 ONL AATTCAATTA (4) 9.6 0.0096 ONL GTGCCACACA (4) 3.8 0.0038 ONL AAACAAACAA (2) 1.9 0.0019 ONL AAGGAGGGCA (6) 1.9 0.0019 ONL ACAACTGTCT (3) 1.9 0.0019 ONL GACACGTGGA (2) 1.9 0.0019