Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.262059	Cbx5	chromobox homolog 5 (Drosophila HP1a)	15		12419
Gene Ontology	chromatin | chromatin assembly/disassembly | chromatin binding | kinetochore | nuclear heterochromatin | nucleus | protein binding
Human Homolog	CBX5[chromobox homolog 5 (HP1 alpha homolog, Drosophila)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 54 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCAGGCAAGT (4) 1.6 0.0016 P8 Cb GC CCTGGTTCCC (8) 1.6 0.0016 P8 Cb GC CTCCGATGCC (2) 1.6 0.0016 P8 Cb GC GCTTGTGGAT (5) 1.6 0.0016 P8 Cb GC GGAAAGAAGA (12) 1.6 0.0016 P8 Cb GC TGGTTTCTGG (10) 1.6 0.0016 Cb medulloblastoma GCTTGTGGAT (5) 2.3 0.0023 P8 GC+1d culture GCTACATAGA (2) 2.3 0.0023 P8 GC+1d culture TGGTTTCTGG (10) 2.3 0.0023 P8 GC+1d culture AACCCACATT (4) 1.1 0.0011 P8 GC+SHH+1d culture TGGTTTCTGG (10) 3.5 0.0035 P8 GC+SHH+1d culture CTCCGATGCC (2) 2.3 0.0023 P8 GC+SHH+1d culture CCAGGCAAGT (4) 1.2 0.0012 3T3 fibroblasts AACCCACATT (4) 7 0.007 3T3 fibroblasts GTTAAGGGGC 3.5 0.0035 3T3 fibroblasts TGGTTTCTGG (10) 3.5 0.0035 E15 cortex GGAAAGAAGA (12) 9.9 0.0099 E15 cortex GTTAAGGGGC 9.9 0.0099 E15 cortex CCAGGCAAGT (4) 4.9 0.0049 P1 cortex AACCCACATT (4) 4.5 0.0045 P1 cortex TGGTTTCTGG (10) 4.5 0.0045 Hypothalamus TGGTTTCTGG (10) 1.8 0.0018 E12.5 retina AACCCACATT (4) 9.4 0.0094 E12.5 retina TGGTTTCTGG (10) 3.8 0.0038 E12.5 retina CCTGGTTCCC (8) 1.9 0.0019 E12.5 retina CTCCGATGCC (2) 1.9 0.0019 E12.5 retina GCTACATAGA (2) 1.9 0.0019 E12.5 retina GTCATCATTA (5) 1.9 0.0019 E14.5 retina TGGTTTCTGG (10) 9.1 0.0091 E16.5 retina TGGTTTCTGG (10) 18.1 0.0181 E18.5 retina CCAGGCAAGT (4) 1.8 0.0018 E18.5 retina GCTACATAGA (2) 1.8 0.0018 E18.5 retina GCTTGTGGAT (5) 1.8 0.0018 E18.5 retina GTCATCATTA (5) 1.8 0.0018 E18.5 retina TGGTTTCTGG (10) 1.8 0.0018 P0.5 retina TGGTTTCTGG (10) 3.9 0.0039 P0.5 retina CCTGGTTCCC (8) 2 0.002 P0.5 retina GCTACATAGA (2) 2 0.002 P0.5 retina GTTAAGGGGC 2 0.002 P2.5 retina TGGTTTCTGG (10) 7 0.007 P2.5 retina AACCCACATT (4) 3.5 0.0035 P4.5 retina CCTGGTTCCC (8) 4 0.004 P4.5 retina GTCATCATTA (5) 4 0.004 P4.5 retina TGGTTTCTGG (10) 2 0.002 P6.5 retina GTCATCATTA (5) 3.3 0.0033 P6.5 retina GCTACATAGA (2) 1.7 0.0017 P6.5 retina GGAAAGAAGA (12) 1.7 0.0017 P10.5 crx- retina TGGTTTCTGG (10) 3.7 0.0037 P10.5 crx+ retina GCTACATAGA (2) 1.9 0.0019 P10.5 crx+ retina TGGTTTCTGG (10) 1.9 0.0019 Adult retinal CCAGGCAAGT (4) 1.9 0.0019 Adult retinal GTTAAGGGGC 1.9 0.0019 ONL TGGTTTCTGG (10) 7.7 0.0077 ONL GCTACATAGA (2) 3.8 0.0038