Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.266328
D5Ertd708e
DNA segment, Chr 5, ERATO Doi 708, expressed
5
5 65.0 cM
68080
Gene Ontology
ATP binding
Human Homolog
MGC14560[protein x 0004]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 62 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CTTGCAAGTG (
2
)
42.4
0.0424
P8 Cb GC
TCTTTTTGAT (
2
)
6.5
0.0065
P8 Cb GC
AAGCAGCTGG
(
14
)
1.6
0.0016
P8 Cb GC
CACACATACA (
9
)
1.6
0.0016
Cb medulloblastoma
CTTGCAAGTG (
2
)
57.8
0.0578
Cb medulloblastoma
TCTTTTTGAT (
2
)
2.3
0.0023
P8 GC+1d culture
CTTGCAAGTG (
2
)
32
0.032
P8 GC+1d culture
TCTTTTTGAT (
2
)
6.8
0.0068
P8 GC+1d culture
AAGCAGCTGG
(
14
)
1.1
0.0011
P8 GC+1d culture
CACACATACA (
9
)
1.1
0.0011
P8 GC+1d culture
TATTATTTAT
(
4
)
1.1
0.0011
P8 GC+SHH+1d culture
CTTGCAAGTG (
2
)
34
0.034
P8 GC+SHH+1d culture
TCTTTTTGAT (
2
)
9.4
0.0094
P8 GC+SHH+1d culture
CACACATACA (
9
)
1.2
0.0012
P8 GC+SHH+1d culture
CGCGCACAAT
1.2
0.0012
3T3 fibroblasts
CTTGCAAGTG (
2
)
49.1
0.0491
3T3 fibroblasts
CGCGCACAAT
3.5
0.0035
E15 cortex
CTTGCAAGTG (
2
)
9.9
0.0099
P1 cortex
TATTATTTAT
(
4
)
4.5
0.0045
Hypothalamus
CTTGCAAGTG (
2
)
56.1
0.0561
Hypothalamus
AAGCAGCTGG
(
14
)
1.8
0.0018
Hypothalamus
CACACATACA (
9
)
1.8
0.0018
E12.5 retina
CTTGCAAGTG (
2
)
35.7
0.0357
E12.5 retina
CACACATACA (
9
)
3.8
0.0038
E14.5 retina
CTTGCAAGTG (
2
)
36.4
0.0364
E14.5 retina
CACACATACA (
9
)
3.6
0.0036
E14.5 retina
TCTTTTTGAT (
2
)
3.6
0.0036
E16.5 retina
CTTGCAAGTG (
2
)
48.9
0.0489
E16.5 retina
TCTTTTTGAT (
2
)
9.1
0.0091
E16.5 retina
CACACATACA (
9
)
3.6
0.0036
E18.5 retina
CTTGCAAGTG (
2
)
50.9
0.0509
E18.5 retina
TATATCCTTC
1.8
0.0018
E18.5 retina
TATTATTTAT
(
4
)
1.8
0.0018
P0.5 retina
CTTGCAAGTG (
2
)
21.6
0.0216
P0.5 retina
CACACATACA (
9
)
5.9
0.0059
P0.5 retina
TATATCCTTC
2
0.002
P0.5 retina
TCTTTTTGAT (
2
)
2
0.002
P2.5 retina
CTTGCAAGTG (
2
)
52.8
0.0528
P2.5 retina
TCTTTTTGAT (
2
)
5.3
0.0053
P2.5 retina
AAGCAGCTGG
(
14
)
3.5
0.0035
P4.5 retina
CTTGCAAGTG (
2
)
51.5
0.0515
P4.5 retina
CACACATACA (
9
)
4
0.004
P4.5 retina
TATTATTTAT
(
4
)
4
0.004
P4.5 retina
TCTTTTTGAT (
2
)
4
0.004
P4.5 retina
AAGCAGCTGG
(
14
)
2
0.002
P6.5 retina
CTTGCAAGTG (
2
)
50
0.05
P6.5 retina
TCTTTTTGAT (
2
)
6.7
0.0067
P6.5 retina
CACACATACA (
9
)
3.3
0.0033
P6.5 retina
AAGCAGCTGG
(
14
)
1.7
0.0017
P6.5 retina
CGCGCACAAT
1.7
0.0017
P6.5 retina
TATATCCTTC
1.7
0.0017
P10.5 crx- retina
CTTGCAAGTG (
2
)
92.9
0.0929
P10.5 crx- retina
TATTATTTAT
(
4
)
3.7
0.0037
P10.5 crx- retina
CACACATACA (
9
)
1.9
0.0019
P10.5 crx- retina
TCTTTTTGAT (
2
)
1.9
0.0019
P10.5 crx+ retina
CTTGCAAGTG (
2
)
90.4
0.0904
P10.5 crx+ retina
CACACATACA (
9
)
1.9
0.0019
Adult retinal
CTTGCAAGTG (
2
)
37
0.037
Adult retinal
CACACATACA (
9
)
1.9
0.0019
ONL
CTTGCAAGTG (
2
)
36.4
0.0364
ONL
CGCGCACAAT
5.7
0.0057
ONL
CACACATACA (
9
)
1.9
0.0019
