Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.266875
Ppl
periplakin
16
16 4.4 cM
19041
Gene Ontology
defense response
|
extrinsic to plasma membrane
Human Homolog
PPL[periplakin]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 37 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AAAATAAAAA (
28
)
6.5
0.0065
P8 Cb GC
GCAGAAGGCA (
2
)
1.6
0.0016
P8 Cb GC
GGGGAGGGGT
(
7
)
1.6
0.0016
Cb medulloblastoma
AAAATAAAAA (
28
)
9.2
0.0092
Cb medulloblastoma
GCCCTTCTGG (
11
)
2.3
0.0023
Cb medulloblastoma
GGGGAGGGGT
(
7
)
2.3
0.0023
P8 GC+1d culture
AAAATAAAAA (
28
)
8
0.008
P8 GC+1d culture
GCCCTTCTGG (
11
)
3.4
0.0034
P8 GC+SHH+1d culture
AAAATAAAAA (
28
)
5.9
0.0059
P8 GC+SHH+1d culture
GGGGAGGGGT
(
7
)
2.3
0.0023
3T3 fibroblasts
GGGGAGGGGT
(
7
)
3.5
0.0035
E15 cortex
GGGGAGGGGT
(
7
)
4.9
0.0049
P1 cortex
AAAATAAAAA (
28
)
9.1
0.0091
Hypothalamus
AAAATAAAAA (
28
)
3.6
0.0036
Hypothalamus
GGGGAGGGGT
(
7
)
3.6
0.0036
E12.5 retina
AAAATAAAAA (
28
)
5.6
0.0056
E14.5 retina
AAAATAAAAA (
28
)
14.6
0.0146
E14.5 retina
GGGGAGGGGT
(
7
)
1.8
0.0018
E16.5 retina
AAAATAAAAA (
28
)
10.9
0.0109
E16.5 retina
GCAGAAGGCA (
2
)
1.8
0.0018
E16.5 retina
GGGGAGGGGT
(
7
)
1.8
0.0018
E18.5 retina
AAAATAAAAA (
28
)
16.4
0.0164
E18.5 retina
GCAGAAGGCA (
2
)
1.8
0.0018
P0.5 retina
AAAATAAAAA (
28
)
5.9
0.0059
P2.5 retina
AAAATAAAAA (
28
)
19.4
0.0194
P2.5 retina
GCAGAAGGCA (
2
)
1.8
0.0018
P4.5 retina
AAAATAAAAA (
28
)
21.8
0.0218
P6.5 retina
AAAATAAAAA (
28
)
11.7
0.0117
P6.5 retina
GCCCTTCTGG (
11
)
5
0.005
P10.5 crx- retina
GCCCTTCTGG (
11
)
5.6
0.0056
P10.5 crx- retina
AAAATAAAAA (
28
)
3.7
0.0037
P10.5 crx+ retina
AAAATAAAAA (
28
)
1.9
0.0019
P10.5 crx+ retina
GCCCTTCTGG (
11
)
1.9
0.0019
Adult retinal
GCCCTTCTGG (
11
)
7.4
0.0074
Adult retinal
AAAATAAAAA (
28
)
1.9
0.0019
ONL
AAAATAAAAA (
28
)
11.5
0.0115
ONL
GCCCTTCTGG (
11
)
1.9
0.0019
