Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.27041
Map3k3
mitogen activated protein kinase kinase kinase 3
11
26406
Mm.27041
AU022928
expressed sequence AU022928
1
98579
Mm.27041
B930069K15Rik
RIKEN cDNA B930069K15 gene
11
320414
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 53 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GGAAAGTCCT
(
7
)
3.3
0.0033
P8 Cb GC
GCCCTGCTGG (
12
)
1.6
0.0016
P8 Cb GC
TTTGATGGAT
(
6
)
1.6
0.0016
Cb medulloblastoma
GGGGGGGGGG (
112
)
6.9
0.0069
Cb medulloblastoma
GTGGCATATA (
13
)
2.3
0.0023
P8 GC+1d culture
GCCCTGCTGG (
12
)
2.3
0.0023
P8 GC+1d culture
GGGGGGGGGG (
112
)
2.3
0.0023
P8 GC+1d culture
GAAGGGCCAA
(
7
)
1.1
0.0011
P8 GC+1d culture
GAATGAAGAA
(
5
)
1.1
0.0011
P8 GC+1d culture
TTTGATGGAT
(
6
)
1.1
0.0011
P8 GC+SHH+1d culture
GGGGGGGGGG (
112
)
7
0.007
P8 GC+SHH+1d culture
GCCCTGCTGG (
12
)
3.5
0.0035
P8 GC+SHH+1d culture
GAAGGGCCAA
(
7
)
2.3
0.0023
P8 GC+SHH+1d culture
GAATGAAGAA
(
5
)
1.2
0.0012
P8 GC+SHH+1d culture
TTTGATGGAT
(
6
)
1.2
0.0012
3T3 fibroblasts
GAAGGGCCAA
(
7
)
10.5
0.0105
3T3 fibroblasts
GGGGGGGGGG (
112
)
3.5
0.0035
E15 cortex
GAAGGGCCAA
(
7
)
4.9
0.0049
E15 cortex
GGAAAGTCCT
(
7
)
4.9
0.0049
E15 cortex
GGGGGGGGGG (
112
)
4.9
0.0049
E15 cortex
GTGGCATATA (
13
)
4.9
0.0049
P1 cortex
GAATGAAGAA
(
5
)
4.5
0.0045
P1 cortex
GGAAAGTCCT
(
7
)
4.5
0.0045
Hypothalamus
GGGGGGGGGG (
112
)
1.8
0.0018
E12.5 retina
GAAGGGCCAA
(
7
)
1.9
0.0019
E12.5 retina
GGAAAGTCCT
(
7
)
1.9
0.0019
E14.5 retina
GAAGGGCCAA
(
7
)
1.8
0.0018
E16.5 retina
GAATGAAGAA
(
5
)
1.8
0.0018
E16.5 retina
GTGGCATATA (
13
)
1.8
0.0018
E16.5 retina
TTTGATGGAT
(
6
)
1.8
0.0018
E18.5 retina
GAAGGGCCAA
(
7
)
1.8
0.0018
P0.5 retina
GAAGGGCCAA
(
7
)
5.9
0.0059
P2.5 retina
GAAGGGCCAA
(
7
)
7
0.007
P2.5 retina
GGGGGGGGGG (
112
)
7
0.007
P2.5 retina
TTTGATGGAT
(
6
)
7
0.007
P2.5 retina
GCCCTGCTGG (
12
)
1.8
0.0018
P2.5 retina
GTGGCATATA (
13
)
1.8
0.0018
P2.5 retina
TAATGTGAGG
(
4
)
1.8
0.0018
P4.5 retina
GGGGGGGGGG (
112
)
9.9
0.0099
P4.5 retina
GCCCTGCTGG (
12
)
5.9
0.0059
P4.5 retina
TAATGTGAGG
(
4
)
2
0.002
P6.5 retina
GGGGGGGGGG (
112
)
3.3
0.0033
P6.5 retina
GTGGCATATA (
13
)
1.7
0.0017
P10.5 crx- retina
GAAGGGCCAA
(
7
)
1.9
0.0019
P10.5 crx- retina
GCCCTGCTGG (
12
)
1.9
0.0019
P10.5 crx- retina
GTGGCATATA (
13
)
1.9
0.0019
P10.5 crx+ retina
GGGGGGGGGG (
112
)
9.6
0.0096
P10.5 crx+ retina
GAAGGGCCAA
(
7
)
1.9
0.0019
P10.5 crx+ retina
GAATGAAGAA
(
5
)
1.9
0.0019
P10.5 crx+ retina
GTGGCATATA (
13
)
1.9
0.0019
Adult retinal
GGGGGGGGGG (
112
)
3.7
0.0037
ONL
GCCCTGCTGG (
12
)
3.8
0.0038
ONL
GGGGGGGGGG (
112
)
1.9
0.0019
