Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.270999	C430014D17Rik	RIKEN cDNA C430014D17 gene	3		229542
Mm.270999	AL118180	expressed sequence AL118180	5		404569
Mm.270999	4930537H20Rik	RIKEN cDNA 4930537H20 gene	3		75825
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 79 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAA (658) 203.9 0.2039 P8 Cb GC CCCTGCCCTG (8) 4.9 0.0049 P8 Cb GC AATGAGTCCT (3) 1.6 0.0016 P8 Cb GC GAAAGCAAAA (6) 1.6 0.0016 P8 Cb GC TACAATCTGA (4) 1.6 0.0016 Cb medulloblastoma AAAAAAAAAA (658) 797.8 0.7978 Cb medulloblastoma CCCTGCCCTG (8) 4.6 0.0046 Cb medulloblastoma TACAATCTGA (4) 2.3 0.0023 Cb medulloblastoma TAGTAAAACC (3) 2.3 0.0023 P8 GC+1d culture AAAAAAAAAA (658) 204.3 0.2043 P8 GC+1d culture CCCTGCCCTG (8) 5.7 0.0057 P8 GC+1d culture TAGTAAAACC (3) 1.1 0.0011 P8 GC+1d culture TTGTGACCAG (4) 1.1 0.0011 P8 GC+SHH+1d culture AAAAAAAAAA (658) 278.7 0.2787 P8 GC+SHH+1d culture TTGTGACCAG (4) 3.5 0.0035 P8 GC+SHH+1d culture CCCTGCCCTG (8) 2.3 0.0023 P8 GC+SHH+1d culture GTAAAGTATT (3) 1.2 0.0012 P8 GC+SHH+1d culture TATATAAGCT (5) 1.2 0.0012 3T3 fibroblasts AAAAAAAAAA (658) 28 0.028 3T3 fibroblasts CCCTGCCCTG (8) 17.5 0.0175 3T3 fibroblasts CAGTGCCTGT (4) 3.5 0.0035 3T3 fibroblasts TTGTGACCAG (4) 3.5 0.0035 E15 cortex AAAAAAAAAA (658) 212.8 0.2128 E15 cortex CCCTGCCCTG (8) 4.9 0.0049 P1 cortex AAAAAAAAAA (658) 245.4 0.2454 Hypothalamus AAAAAAAAAA (658) 123.2 0.1232 Hypothalamus CAGTGCCTGT (4) 3.6 0.0036 Hypothalamus CCCTGCCCTG (8) 1.8 0.0018 Hypothalamus TATATAAGCT (5) 1.8 0.0018 E12.5 retina AAAAAAAAAA (658) 138.9 0.1389 E12.5 retina CCCTGCCCTG (8) 3.8 0.0038 E12.5 retina CAGTGCCTGT (4) 1.9 0.0019 E12.5 retina CTGGTCTTGA (5) 1.9 0.0019 E12.5 retina TACAATCTGA (4) 1.9 0.0019 E14.5 retina AAAAAAAAAA (658) 94.7 0.0947 E14.5 retina CCCTGCCCTG (8) 3.6 0.0036 E14.5 retina CAGTGCCTGT (4) 1.8 0.0018 E16.5 retina AAAAAAAAAA (658) 43.5 0.0435 E16.5 retina AATGAGTCCT (3) 1.8 0.0018 E16.5 retina CTGGTCTTGA (5) 1.8 0.0018 E18.5 retina AAAAAAAAAA (658) 374.7 0.3747 E18.5 retina TTGTGACCAG (4) 3.6 0.0036 E18.5 retina CCCTGCCCTG (8) 1.8 0.0018 E18.5 retina GTAAAGTATT (3) 1.8 0.0018 P0.5 retina AAAAAAAAAA (658) 117.8 0.1178 P0.5 retina CCCTGCCCTG (8) 5.9 0.0059 P0.5 retina CAGTGCCTGT (4) 2 0.002 P0.5 retina GAAAGCAAAA (6) 2 0.002 P0.5 retina TGGGTTCTAG (3) 2 0.002 P2.5 retina AAAAAAAAAA (658) 329.1 0.3291 P2.5 retina CCCTGCCCTG (8) 3.5 0.0035 P2.5 retina GTAAAGTATT (3) 3.5 0.0035 P4.5 retina AAAAAAAAAA (658) 283.3 0.2833 P4.5 retina CCCTGCCCTG (8) 4 0.004 P4.5 retina CTGGTCTTGA (5) 2 0.002 P4.5 retina GAAAGCAAAA (6) 2 0.002 P4.5 retina TATATAAGCT (5) 2 0.002 P6.5 retina AAAAAAAAAA (658) 266.8 0.2668 P6.5 retina CCCTGCCCTG (8) 15 0.015 P6.5 retina TATATAAGCT (5) 3.3 0.0033 P6.5 retina GAAAGCAAAA (6) 1.7 0.0017 P6.5 retina TAGTAAAACC (3) 1.7 0.0017 P6.5 retina TGGGTTCTAG (3) 1.7 0.0017 P6.5 retina TTGTGACCAG (4) 1.7 0.0017 P10.5 crx- retina AAAAAAAAAA (658) 44.6 0.0446 P10.5 crx- retina CCCTGCCCTG (8) 9.3 0.0093 P10.5 crx- retina CAGTGCCTGT (4) 3.7 0.0037 P10.5 crx+ retina AAAAAAAAAA (658) 96.1 0.0961 P10.5 crx+ retina CCCTGCCCTG (8) 13.5 0.0135 P10.5 crx+ retina CTGGTCTTGA (5) 3.8 0.0038 P10.5 crx+ retina AATGAGTCCT (3) 1.9 0.0019 P10.5 crx+ retina TTGTGACCAG (4) 1.9 0.0019 Adult retinal AAAAAAAAAA (658) 57.4 0.0574 Adult retinal CCCTGCCCTG (8) 9.3 0.0093 Adult retinal TGGGTTCTAG (3) 1.9 0.0019 Adult retinal TTGTGACCAG (4) 1.9 0.0019 ONL AAAAAAAAAA (658) 103.4 0.1034 ONL CCCTGCCCTG (8) 5.7 0.0057 ONL TACAATCTGA (4) 1.9 0.0019