Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.271754
2610024N01Rik
RIKEN cDNA 2610024N01 gene
3
71807
Gene Ontology
tRNA ligase activity
Human Homolog
FLJ12528[threonyl-tRNA synthetase]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 62 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GTGGCACACA (
30
)
6.5
0.0065
P8 Cb GC
GTGTGGGGGC
(
2
)
6.5
0.0065
P8 Cb GC
AAACTGAAGC (
9
)
1.6
0.0016
Cb medulloblastoma
GTGGCACACA (
30
)
11.6
0.0116
Cb medulloblastoma
GTGTGGGGGC
(
2
)
2.3
0.0023
P8 GC+1d culture
GTGGCACACA (
30
)
13.7
0.0137
P8 GC+1d culture
TTTATTTTCA (
5
)
2.3
0.0023
P8 GC+1d culture
GGGTGGGGCT (
4
)
1.1
0.0011
P8 GC+SHH+1d culture
GTGGCACACA (
30
)
2.3
0.0023
P8 GC+SHH+1d culture
GTGTGGGGGC
(
2
)
2.3
0.0023
P8 GC+SHH+1d culture
AAACTGAAGC (
9
)
1.2
0.0012
P8 GC+SHH+1d culture
CAGAAGAAGT (
3
)
1.2
0.0012
P8 GC+SHH+1d culture
TTTATTTTCA (
5
)
1.2
0.0012
3T3 fibroblasts
GTGGCACACA (
30
)
14
0.014
3T3 fibroblasts
GGGTGGGGCT (
4
)
3.5
0.0035
3T3 fibroblasts
GTGTGGGGGC
(
2
)
3.5
0.0035
E15 cortex
GTGGCACACA (
30
)
24.7
0.0247
E15 cortex
GTGTGGGGGC
(
2
)
4.9
0.0049
P1 cortex
GTGGCACACA (
30
)
4.5
0.0045
P1 cortex
GTGTGGGGGC
(
2
)
4.5
0.0045
Hypothalamus
GTGGCACACA (
30
)
7.2
0.0072
Hypothalamus
GTGTGGGGGC
(
2
)
7.2
0.0072
Hypothalamus
GCTGATGAGG (
4
)
3.6
0.0036
E12.5 retina
GTGGCACACA (
30
)
11.3
0.0113
E12.5 retina
GTGTGGGGGC
(
2
)
3.8
0.0038
E12.5 retina
CAGAAGAAGT (
3
)
1.9
0.0019
E12.5 retina
TTTATTTTCA (
5
)
1.9
0.0019
E14.5 retina
GTGGCACACA (
30
)
18.2
0.0182
E14.5 retina
GTGTGGGGGC
(
2
)
7.3
0.0073
E16.5 retina
GTGGCACACA (
30
)
9.1
0.0091
E16.5 retina
GTGTGGGGGC
(
2
)
9.1
0.0091
E16.5 retina
GGGTGGGGCT (
4
)
1.8
0.0018
E18.5 retina
GTGGCACACA (
30
)
5.5
0.0055
E18.5 retina
GTGTGGGGGC
(
2
)
1.8
0.0018
E18.5 retina
TTTATTTTCA (
5
)
1.8
0.0018
P0.5 retina
GTGGCACACA (
30
)
11.8
0.0118
P0.5 retina
GTGTGGGGGC
(
2
)
3.9
0.0039
P0.5 retina
GGGTGGGGCT (
4
)
2
0.002
P0.5 retina
TTTATTTTCA (
5
)
2
0.002
P2.5 retina
GTGGCACACA (
30
)
17.6
0.0176
P2.5 retina
GTGTGGGGGC
(
2
)
3.5
0.0035
P2.5 retina
AAACTGAAGC (
9
)
1.8
0.0018
P4.5 retina
GTGGCACACA (
30
)
11.9
0.0119
P4.5 retina
GTGTGGGGGC
(
2
)
5.9
0.0059
P4.5 retina
GCTGATGAGG (
4
)
2
0.002
P6.5 retina
GTGGCACACA (
30
)
26.7
0.0267
P6.5 retina
GTGTGGGGGC
(
2
)
8.3
0.0083
P6.5 retina
TTTATTTTCA (
5
)
3.3
0.0033
P6.5 retina
GGCCTGTGCG
(
3
)
1.7
0.0017
P10.5 crx- retina
GTGGCACACA (
30
)
13
0.013
P10.5 crx- retina
GTGTGGGGGC
(
2
)
7.4
0.0074
P10.5 crx- retina
GGCCTGTGCG
(
3
)
1.9
0.0019
P10.5 crx+ retina
GTGTGGGGGC
(
2
)
11.5
0.0115
P10.5 crx+ retina
GTGGCACACA (
30
)
7.7
0.0077
P10.5 crx+ retina
CAGAAGAAGT (
3
)
1.9
0.0019
P10.5 crx+ retina
GGCCTGTGCG
(
3
)
1.9
0.0019
Adult retinal
GTGGCACACA (
30
)
5.6
0.0056
Adult retinal
GTGTGGGGGC
(
2
)
5.6
0.0056
Adult retinal
GGGTGGGGCT (
4
)
1.9
0.0019
ONL
GTGGCACACA (
30
)
24.9
0.0249
ONL
GTGTGGGGGC
(
2
)
11.5
0.0115
ONL
TTTATTTTCA (
5
)
3.8
0.0038
