Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.27252	2010001M09Rik	RIKEN cDNA 2010001M09 gene	18		69816
Gene Ontology	extracellular space
Human Homolog	PACAP[proapoptotic caspase adaptor protein]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 41 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TAGCCCAGGC (30) 1.6 0.0016 P8 Cb GC TAGGCCAGGT (3) 1.6 0.0016 Cb medulloblastoma TAGCCCAGGC (30) 4.6 0.0046 Cb medulloblastoma GCTTCTCCAG (4) 2.3 0.0023 Cb medulloblastoma TAGGCCAGGT (3) 2.3 0.0023 P8 GC+1d culture TAGGCCAGGT (3) 3.4 0.0034 P8 GC+1d culture GCTTCTCCAG (4) 1.1 0.0011 P8 GC+1d culture TAGCCCAGGC (30) 1.1 0.0011 P8 GC+SHH+1d culture TAGCCCAGGC (30) 8.2 0.0082 P8 GC+SHH+1d culture TAGGCCAGGT (3) 8.2 0.0082 P8 GC+SHH+1d culture GCTTCTCCAG (4) 2.3 0.0023 P8 GC+SHH+1d culture TAGGCCAGGC (3) 2.3 0.0023 3T3 fibroblasts TAGCCCAGGC (30) 14 0.014 E15 cortex TAGCCCAGGC (30) 24.7 0.0247 E15 cortex TAGGCCAGGT (3) 4.9 0.0049 Hypothalamus TAGCCCAGGC (30) 7.2 0.0072 Hypothalamus TAGGCCAGGT (3) 1.8 0.0018 E12.5 retina TAGGCCAGGT (3) 9.4 0.0094 E12.5 retina TAGCCCAGGC (30) 7.5 0.0075 E14.5 retina TAGCCCAGGC (30) 12.8 0.0128 E14.5 retina TAGGCCAGGT (3) 5.5 0.0055 E16.5 retina TAGCCCAGGC (30) 7.2 0.0072 E16.5 retina TAGGCCAGGT (3) 3.6 0.0036 E18.5 retina TAGCCCAGGC (30) 7.3 0.0073 E18.5 retina TAGGCCAGGT (3) 5.5 0.0055 P0.5 retina TAGCCCAGGC (30) 5.9 0.0059 P0.5 retina GCTTCTCCAG (4) 2 0.002 P0.5 retina TAGGCCAGGT (3) 2 0.002 P2.5 retina TAGCCCAGGC (30) 8.8 0.0088 P2.5 retina TAGGCCAGGT (3) 1.8 0.0018 P4.5 retina TAGCCCAGGC (30) 2 0.002 P4.5 retina TAGGCCAGGT (3) 2 0.002 P6.5 retina TAGCCCAGGC (30) 5 0.005 P6.5 retina TAGGCCAGGC (3) 1.7 0.0017 P6.5 retina TAGGCCAGGT (3) 1.7 0.0017 P10.5 crx- retina TAGCCCAGGC (30) 1.9 0.0019 P10.5 crx- retina TAGGCCAGGT (3) 1.9 0.0019 P10.5 crx+ retina TAGCCCAGGC (30) 3.8 0.0038 Adult retinal TAGCCCAGGC (30) 1.9 0.0019 Adult retinal TAGGCCAGGC (3) 1.9 0.0019 ONL TAGCCCAGGC (30) 9.6 0.0096