Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.273251	Sdh1	sorbitol dehydrogenase 1	2	2 66.0 cM	20322
Gene Ontology	alcohol dehydrogenase activity, zinc-dependent | L-iditol 2-dehydrogenase activity | oxidoreductase activity | zinc ion binding
Human Homolog	SORD[sorbitol dehydrogenase]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 182 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TAAAAAAAAA (196) 47.3 0.0473 P8 Cb GC TTAAAAAAAA (80) 13.1 0.0131 P8 Cb GC TTCAAAAAAA (25) 13.1 0.0131 P8 Cb GC TTAAAAAAGA (10) 4.9 0.0049 P8 Cb GC GGGCTGCTGG (11) 3.3 0.0033 P8 Cb GC ATTTTTTTTT (36) 1.6 0.0016 P8 Cb GC GCCCAGACCT (3) 1.6 0.0016 P8 Cb GC TTAAAAAAAG (5) 1.6 0.0016 P8 Cb GC TTGGAAAAAA (8) 1.6 0.0016 Cb medulloblastoma TAAAAAAAAA (196) 106.4 0.1064 Cb medulloblastoma TTAAAAAAAA (80) 53.2 0.0532 Cb medulloblastoma TTCAAAAAAA (25) 37 0.037 Cb medulloblastoma GGGGGGGGGG (112) 6.9 0.0069 Cb medulloblastoma TTAAAAAAGA (10) 6.9 0.0069 Cb medulloblastoma TTTAAAAAAA (34) 6.9 0.0069 Cb medulloblastoma GCCCAGACCT (3) 2.3 0.0023 Cb medulloblastoma TTAAAAAGAA (11) 2.3 0.0023 P8 GC+1d culture TAAAAAAAAA (196) 66.2 0.0662 P8 GC+1d culture TTAAAAAAAA (80) 28.5 0.0285 P8 GC+1d culture TTCAAAAAAA (25) 12.6 0.0126 P8 GC+1d culture TTAAAAAAGA (10) 9.1 0.0091 P8 GC+1d culture GGGGGGGGGG (112) 2.3 0.0023 P8 GC+1d culture TTGGAAAAAA (8) 2.3 0.0023 P8 GC+1d culture AGGCTGCTGG (5) 1.1 0.0011 P8 GC+1d culture ATTTTTTTTT (36) 1.1 0.0011 P8 GC+1d culture TTAAAAAGAA (11) 1.1 0.0011 P8 GC+SHH+1d culture TAAAAAAAAA (196) 93.7 0.0937 P8 GC+SHH+1d culture TTAAAAAAAA (80) 34 0.034 P8 GC+SHH+1d culture TTCAAAAAAA (25) 29.3 0.0293 P8 GC+SHH+1d culture GGGGGGGGGG (112) 7 0.007 P8 GC+SHH+1d culture TTTAAAAAAA (34) 5.9 0.0059 P8 GC+SHH+1d culture ATTTTTTTTT (36) 3.5 0.0035 P8 GC+SHH+1d culture GCCCAGACCT (3) 3.5 0.0035 P8 GC+SHH+1d culture TTAAAAAAAG (5) 3.5 0.0035 P8 GC+SHH+1d culture TTGGAAAAAA (8) 3.5 0.0035 P8 GC+SHH+1d culture TTAAAAAAGA (10) 2.3 0.0023 P8 GC+SHH+1d culture AGCAGGAGCA (3) 1.2 0.0012 P8 GC+SHH+1d culture GGGGGCAGGC (3) 1.2 0.0012 P8 GC+SHH+1d culture TTAAAAAACA (4) 1.2 0.0012 P8 GC+SHH+1d culture TTAAAAAGAA (11) 1.2 0.0012 P8 GC+SHH+1d culture TTAAAAGAAA (5) 1.2 0.0012 P8 GC+SHH+1d culture TTAAAGAAAA (3) 1.2 0.0012 P8 GC+SHH+1d culture TTAAGAAAAA (11) 1.2 0.0012 3T3 fibroblasts AGGCTGCTGG (5) 7 0.007 3T3 fibroblasts GCCCAGACCT (3) 7 0.007 3T3 fibroblasts TAAAAAAAAA (196) 7 0.007 3T3 fibroblasts GGGGGCAGGC (3) 3.5 0.0035 3T3 fibroblasts GGGGGGGGGG (112) 3.5 0.0035 E15 cortex TTCAAAAAAA (25) 29.7 0.0297 E15 cortex TAAAAAAAAA (196) 9.9 0.0099 E15 cortex AGGCTGCTGG (5) 4.9 0.0049 E15 cortex GCCCAGACCT (3) 4.9 0.0049 E15 cortex GGGGGGGGGG (112) 4.9 0.0049 E15 cortex TTAAAAAAAA (80) 4.9 0.0049 P1 cortex TAAAAAAAAA (196) 50 0.05 P1 cortex TTAAAAAAAA (80) 13.6 0.0136 P1 cortex ATTTTTTTTT (36) 4.5 0.0045 P1 cortex TTAAAAGAAA (5) 4.5 0.0045 P1 cortex TTCAAAAAAA (25) 4.5 0.0045 P1 cortex TTGGAAAAAA (8) 4.5 0.0045 Hypothalamus TAAAAAAAAA (196) 32.6 0.0326 Hypothalamus TTAAAAAAAA (80) 19.9 0.0199 Hypothalamus TTTAAAAAAA (34) 10.9 0.0109 Hypothalamus GCCCAGACCT (3) 9.1 0.0091 Hypothalamus TTCAAAAAAA (25) 7.2 0.0072 Hypothalamus GGGCTGCTGG (11) 1.8 0.0018 Hypothalamus GGGGGGGGGG (112) 1.8 0.0018 Hypothalamus TTAAAAAAAG (5) 1.8 0.0018 Hypothalamus TTAAAGAAAA (3) 1.8 0.0018 E12.5 retina TAAAAAAAAA (196) 24.4 0.0244 E12.5 retina TTAAAAAAAA (80) 11.3 0.0113 E12.5 retina TTCAAAAAAA (25) 9.4 0.0094 E12.5 retina TTAAAAAAGA (10) 5.6 0.0056 E12.5 retina AGCAGGAGCA (3) 1.9 0.0019 E12.5 retina GCCCAGACCT (3) 1.9 0.0019 E12.5 retina GGCAAGGCCC (8) 1.9 0.0019 E12.5 retina TTGGAAAAAA (8) 1.9 0.0019 E12.5 retina TTTAAAAAAA (34) 1.9 0.0019 E14.5 retina TAAAAAAAAA (196) 41.9 0.0419 E14.5 retina TTCAAAAAAA (25) 20 0.02 E14.5 retina TTAAAAAAAA (80) 16.4 0.0164 E14.5 retina TTAAAAAAGA (10) 9.1 0.0091 E14.5 retina TTTAAAAAAA (34) 9.1 0.0091 E14.5 retina GCCCAGACCT (3) 3.6 0.0036 E14.5 retina AGCAGGAGCA (3) 1.8 0.0018 E14.5 retina ATTTTTTTTT (36) 1.8 0.0018 E14.5 retina TTAAAAAACA (4) 1.8 0.0018 E16.5 retina TAAAAAAAAA (196) 23.5 0.0235 E16.5 retina TTAAAAAAAA (80) 16.3 0.0163 E16.5 retina TTCAAAAAAA (25) 9.1 0.0091 E16.5 retina TTAAAAAAAG (5) 3.6 0.0036 E16.5 retina AGCAGGAGCA (3) 1.8 0.0018 E16.5 retina AGGCTGCTGG (5) 1.8 0.0018 E16.5 retina GCCCAGACCT (3) 1.8 0.0018 E16.5 retina GGGCTGCTGG (11) 1.8 0.0018 E16.5 retina TTAAAAAACA (4) 1.8 0.0018 E16.5 retina TTTAAAAAAA (34) 1.8 0.0018 E18.5 retina TAAAAAAAAA (196) 107.3 0.1073 E18.5 retina TTAAAAAAAA (80) 50.9 0.0509 E18.5 retina TTCAAAAAAA (25) 36.4 0.0364 E18.5 retina TTTAAAAAAA (34) 10.9 0.0109 E18.5 retina TTGGAAAAAA (8) 9.1 0.0091 E18.5 retina GCCCAGACCT (3) 3.6 0.0036 E18.5 retina GGCAAGGCCC (8) 3.6 0.0036 E18.5 retina ATTTTTTTTT (36) 1.8 0.0018 E18.5 retina TTAAAAAAGA (10) 1.8 0.0018 E18.5 retina TTAAAGAAAA (3) 1.8 0.0018 P0.5 retina TAAAAAAAAA (196) 37.3 0.0373 P0.5 retina TTAAAAAAAA (80) 17.7 0.0177 P0.5 retina TTCAAAAAAA (25) 9.8 0.0098 P0.5 retina ATTTTTTTTT (36) 3.9 0.0039 P0.5 retina GCCCAGACCT (3) 2 0.002 P0.5 retina TTAAAAAAGA (10) 2 0.002 P0.5 retina TTTAAAAAAA (34) 2 0.002 P2.5 retina TAAAAAAAAA (196) 72.2 0.0722 P2.5 retina TTAAAAAAAA (80) 40.5 0.0405 P2.5 retina GGGGGGGGGG (112) 7 0.007 P2.5 retina TTCAAAAAAA (25) 7 0.007 P2.5 retina GCCCAGACCT (3) 5.3 0.0053 P2.5 retina ATTTTTTTTT (36) 3.5 0.0035 P2.5 retina TTAAAAAAAG (5) 3.5 0.0035 P2.5 retina TTGGAAAAAA (8) 3.5 0.0035 P2.5 retina AGCAGGAGCA (3) 1.8 0.0018 P2.5 retina TTAAGAAAAA (11) 1.8 0.0018 P2.5 retina TTTAAAAAAA (34) 1.8 0.0018 P4.5 retina TAAAAAAAAA (196) 122.8 0.1228 P4.5 retina TTAAAAAAAA (80) 47.6 0.0476 P4.5 retina TTCAAAAAAA (25) 31.7 0.0317 P4.5 retina GGGGGGGGGG (112) 9.9 0.0099 P4.5 retina GGCAAGGCCC (8) 5.9 0.0059 P4.5 retina TTAAAAAAGA (10) 5.9 0.0059 P4.5 retina TTTAAAAAAA (34) 5.9 0.0059 P4.5 retina ATTTTTTTTT (36) 4 0.004 P4.5 retina GCCCAGACCT (3) 4 0.004 P4.5 retina TTAAAAAAAG (5) 4 0.004 P6.5 retina TAAAAAAAAA (196) 63.4 0.0634 P6.5 retina TTAAAAAAAA (80) 16.7 0.0167 P6.5 retina TTCAAAAAAA (25) 8.3 0.0083 P6.5 retina TTTAAAAAAA (34) 6.7 0.0067 P6.5 retina TTAAAAAAGA (10) 5 0.005 P6.5 retina TTGGAAAAAA (8) 5 0.005 P6.5 retina GGGGGGGGGG (112) 3.3 0.0033 P6.5 retina AGGCTGCTGG (5) 1.7 0.0017 P6.5 retina GGCAAGGCCC (8) 1.7 0.0017 P6.5 retina GGGCTGCTGG (11) 1.7 0.0017 P6.5 retina TTAAAGAAAA (3) 1.7 0.0017 P10.5 crx- retina TTAAAAAAAA (80) 13 0.013 P10.5 crx- retina TAAAAAAAAA (196) 9.3 0.0093 P10.5 crx- retina TTCAAAAAAA (25) 5.6 0.0056 P10.5 crx- retina GCCCAGACCT (3) 3.7 0.0037 P10.5 crx- retina TTAAAAAAGA (10) 3.7 0.0037 P10.5 crx- retina TTAAAAAAAG (5) 1.9 0.0019 P10.5 crx+ retina TAAAAAAAAA (196) 25 0.025 P10.5 crx+ retina GGGGGGGGGG (112) 9.6 0.0096 P10.5 crx+ retina TTCAAAAAAA (25) 9.6 0.0096 P10.5 crx+ retina TTAAAAAAAA (80) 5.8 0.0058 P10.5 crx+ retina AGCAGGAGCA (3) 3.8 0.0038 P10.5 crx+ retina GGCAAGGCCC (8) 3.8 0.0038 P10.5 crx+ retina GCCCAGACCT (3) 1.9 0.0019 P10.5 crx+ retina TTAAAAAACA (4) 1.9 0.0019 P10.5 crx+ retina TTAAAAAAGA (10) 1.9 0.0019 Adult retinal TAAAAAAAAA (196) 18.5 0.0185 Adult retinal TTAAAAAAAA (80) 7.4 0.0074 Adult retinal TTCAAAAAAA (25) 5.6 0.0056 Adult retinal GGGGGGGGGG (112) 3.7 0.0037 Adult retinal GGCAAGGCCC (8) 1.9 0.0019 Adult retinal GGGGGCAGGC (3) 1.9 0.0019 Adult retinal TTAAAAAAGA (10) 1.9 0.0019 Adult retinal TTGGAAAAAA (8) 1.9 0.0019 ONL TAAAAAAAAA (196) 28.7 0.0287 ONL TTAAAAAAAA (80) 7.7 0.0077 ONL TTTAAAAAAA (34) 7.7 0.0077 ONL TTAAAAAAGA (10) 5.7 0.0057 ONL TTCAAAAAAA (25) 3.8 0.0038 ONL AGCAGGAGCA (3) 1.9 0.0019 ONL GGCAAGGCCC (8) 1.9 0.0019 ONL GGGGGCAGGC (3) 1.9 0.0019 ONL GGGGGGGGGG (112) 1.9 0.0019 ONL TTAAAAAAAG (5) 1.9 0.0019 ONL TTAAAAGAAA (5) 1.9 0.0019 ONL TTAAGAAAAA (11) 1.9 0.0019 ONL TTGGAAAAAA (8) 1.9 0.0019