Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.27372	Ureb1	upstream regulatory element binding protein 1e	X		59026
Mm.27372	C430014N20Rik	RIKEN cDNA C430014N20 gene	X		237117
Mm.27372	C80292	expressed sequence C80292	X		97602
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 98 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGTTAAGAAG (3) 6.5 0.0065 P8 Cb GC GTCTCACTGT (5) 4.9 0.0049 P8 Cb GC TTTATGTTGA (4) 4.9 0.0049 P8 Cb GC CTACTATTGG (3) 3.3 0.0033 P8 Cb GC GAAAAAGAAA (15) 3.3 0.0033 P8 Cb GC GAGGCATTTC (13) 1.6 0.0016 Cb medulloblastoma GAGGCATTTC (13) 2.3 0.0023 Cb medulloblastoma TTGTCACATC (5) 2.3 0.0023 P8 GC+1d culture GAGGCATTTC (13) 4.6 0.0046 P8 GC+1d culture GTCTCACTGT (5) 4.6 0.0046 P8 GC+1d culture TTGTCACATC (5) 4.6 0.0046 P8 GC+1d culture TGTTAAGAAG (3) 3.4 0.0034 P8 GC+1d culture CTACTATTGG (3) 2.3 0.0023 P8 GC+SHH+1d culture TTGTCACATC (5) 4.7 0.0047 P8 GC+SHH+1d culture GTCTCACTGT (5) 3.5 0.0035 P8 GC+SHH+1d culture TGTTAAGAAG (3) 3.5 0.0035 P8 GC+SHH+1d culture GAGGCATTTC (13) 2.3 0.0023 P8 GC+SHH+1d culture CTACTATTGG (3) 1.2 0.0012 P8 GC+SHH+1d culture GAAAAAGAAA (15) 1.2 0.0012 P8 GC+SHH+1d culture TTTATGTTGA (4) 1.2 0.0012 P8 GC+SHH+1d culture TTTGTCCAAG (4) 1.2 0.0012 3T3 fibroblasts CTACTATTGG (3) 3.5 0.0035 3T3 fibroblasts GTCTCACTGT (5) 3.5 0.0035 3T3 fibroblasts TGTTAAGAAG (3) 3.5 0.0035 E15 cortex GAGGCATTTC (13) 24.7 0.0247 E15 cortex TGTTAAGAAG (3) 9.9 0.0099 E15 cortex TTGTCACATC (5) 4.9 0.0049 P1 cortex TGTTAAGAAG (3) 22.7 0.0227 P1 cortex TTGTCACATC (5) 4.5 0.0045 Hypothalamus TTGTCACATC (5) 18.1 0.0181 Hypothalamus GTCTCACTGT (5) 7.2 0.0072 Hypothalamus TGTTAAGAAG (3) 7.2 0.0072 Hypothalamus TTTATGTTGA (4) 3.6 0.0036 Hypothalamus GAAAAGGGAG (7) 1.8 0.0018 Hypothalamus GAGGCATTTC (13) 1.8 0.0018 E12.5 retina GTCTCACTGT (5) 5.6 0.0056 E12.5 retina CAAGCCAGTG (4) 1.9 0.0019 E12.5 retina CTACTATTGG (3) 1.9 0.0019 E12.5 retina GAAAAGGGAG (7) 1.9 0.0019 E12.5 retina GAGGCATTTC (13) 1.9 0.0019 E12.5 retina TTGTCACATC (5) 1.9 0.0019 E14.5 retina GAGGCATTTC (13) 10.9 0.0109 E14.5 retina TTGTCACATC (5) 5.5 0.0055 E14.5 retina GTCTCACTGT (5) 3.6 0.0036 E16.5 retina GTCTCACTGT (5) 10.9 0.0109 E16.5 retina GAGGCATTTC (13) 7.2 0.0072 E16.5 retina TTGTCACATC (5) 7.2 0.0072 E16.5 retina CAAGCCAGTG (4) 1.8 0.0018 E16.5 retina TTTATGTTGA (4) 1.8 0.0018 E18.5 retina GTCTCACTGT (5) 5.5 0.0055 E18.5 retina GAAAAAGAAA (15) 1.8 0.0018 E18.5 retina GAGGCATTTC (13) 1.8 0.0018 E18.5 retina TTGTCACATC (5) 1.8 0.0018 E18.5 retina TTTATGTTGA (4) 1.8 0.0018 E18.5 retina TTTGTCCAAG (4) 1.8 0.0018 P0.5 retina CTACTATTGG (3) 5.9 0.0059 P0.5 retina GAGGCATTTC (13) 5.9 0.0059 P0.5 retina TGTTAAGAAG (3) 5.9 0.0059 P0.5 retina GTCTCACTGT (5) 3.9 0.0039 P0.5 retina TTGTCACATC (5) 2 0.002 P2.5 retina GAGGCATTTC (13) 5.3 0.0053 P2.5 retina GTCTCACTGT (5) 5.3 0.0053 P2.5 retina CTACTATTGG (3) 3.5 0.0035 P2.5 retina GAAAAAGAAA (15) 3.5 0.0035 P2.5 retina TGTTAAGAAG (3) 1.8 0.0018 P4.5 retina GTCTCACTGT (5) 13.9 0.0139 P4.5 retina TACCCACACT (5) 5.9 0.0059 P4.5 retina CAAGCCAGTG (4) 2 0.002 P4.5 retina TGTTAAGAAG (3) 2 0.002 P4.5 retina TTGTCACATC (5) 2 0.002 P4.5 retina TTTATGTTGA (4) 2 0.002 P6.5 retina GTCTCACTGT (5) 10 0.01 P6.5 retina GAGGCATTTC (13) 5 0.005 P6.5 retina TACCCACACT (5) 3.3 0.0033 P6.5 retina TGTTAAGAAG (3) 3.3 0.0033 P6.5 retina CTACTATTGG (3) 1.7 0.0017 P6.5 retina TTGTCACATC (5) 1.7 0.0017 P10.5 crx- retina TTGTCACATC (5) 13 0.013 P10.5 crx- retina GAGGCATTTC (13) 7.4 0.0074 P10.5 crx- retina GTCTCACTGT (5) 3.7 0.0037 P10.5 crx- retina TACCCACACT (5) 3.7 0.0037 P10.5 crx- retina TGTTAAGAAG (3) 3.7 0.0037 P10.5 crx- retina TTTATGTTGA (4) 3.7 0.0037 P10.5 crx- retina CAAGCCAGTG (4) 1.9 0.0019 P10.5 crx+ retina GAGGCATTTC (13) 9.6 0.0096 P10.5 crx+ retina TACCCACACT (5) 3.8 0.0038 P10.5 crx+ retina TGTTAAGAAG (3) 1.9 0.0019 P10.5 crx+ retina TTTGTCCAAG (4) 1.9 0.0019 Adult retinal GAGGCATTTC (13) 5.6 0.0056 Adult retinal TGTTAAGAAG (3) 5.6 0.0056 Adult retinal TTGTCACATC (5) 5.6 0.0056 Adult retinal GTCTCACTGT (5) 3.7 0.0037 Adult retinal CTACTATTGG (3) 1.9 0.0019 ONL GAGGCATTTC (13) 3.8 0.0038 ONL TGTTAAGAAG (3) 3.8 0.0038 ONL CTACTATTGG (3) 1.9 0.0019 ONL GTCTCACTGT (5) 1.9 0.0019 ONL TTTATGTTGA (4) 1.9 0.0019