Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.27387	Hspa5bp1	heat shock 70kDa protein 5 binding protein 1	19		98170
Gene Ontology	integral to membrane | protein folding | response to unfolded protein
Human Homolog	HSPA5BP1[heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) binding protein 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 70 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTGGGCCCAG (8) 8.2 0.0082 P8 Cb GC CCCCTTATTT (3) 4.9 0.0049 P8 Cb GC GTTCTCCAAA (5) 4.9 0.0049 Cb medulloblastoma CCCCTTATTT (3) 11.6 0.0116 Cb medulloblastoma CTGGGCCCAG (8) 9.2 0.0092 Cb medulloblastoma GTTCTCCAAA (5) 9.2 0.0092 Cb medulloblastoma CAGTCCTGGC (5) 2.3 0.0023 P8 GC+1d culture CTGGGCCCAG (8) 19.4 0.0194 P8 GC+1d culture CCCCTTATTT (3) 16 0.016 P8 GC+1d culture GTTCTCCAAA (5) 3.4 0.0034 P8 GC+SHH+1d culture CTGGGCCCAG (8) 11.7 0.0117 P8 GC+SHH+1d culture GTTCTCCAAA (5) 10.5 0.0105 P8 GC+SHH+1d culture CCCCTTATTT (3) 9.4 0.0094 P8 GC+SHH+1d culture TGTGGTCTGT (3) 1.2 0.0012 3T3 fibroblasts CTGGGCCCAG (8) 7 0.007 3T3 fibroblasts GTTCTCCAAA (5) 3.5 0.0035 E15 cortex GTTCTCCAAA (5) 9.9 0.0099 E15 cortex CAGCCCTGGG (12) 4.9 0.0049 P1 cortex CTGGGCCCAG (8) 13.6 0.0136 P1 cortex GTTCTCCAAA (5) 13.6 0.0136 P1 cortex CACACACAGA (5) 9.1 0.0091 P1 cortex CCCCTTATTT (3) 4.5 0.0045 Hypothalamus CTGGGCCCAG (8) 25.4 0.0254 Hypothalamus CCCCTTATTT (3) 3.6 0.0036 Hypothalamus GTTCTCCAAA (5) 3.6 0.0036 E12.5 retina CCCCTTATTT (3) 5.6 0.0056 E12.5 retina GTTCTCCAAA (5) 3.8 0.0038 E12.5 retina CTGGGCCCAG (8) 1.9 0.0019 E12.5 retina TGTGGTCTGT (3) 1.9 0.0019 E14.5 retina CCCCTTATTT (3) 12.8 0.0128 E14.5 retina CTGGGCCCAG (8) 7.3 0.0073 E14.5 retina TGTGGTCTGT (3) 3.6 0.0036 E14.5 retina CACACACAGA (5) 1.8 0.0018 E14.5 retina GTTCTCCAAA (5) 1.8 0.0018 E16.5 retina CCCCTTATTT (3) 10.9 0.0109 E16.5 retina CTGGGCCCAG (8) 3.6 0.0036 E16.5 retina GTTCTCCAAA (5) 1.8 0.0018 E16.5 retina TGTGGTCTGT (3) 1.8 0.0018 E18.5 retina GTTCTCCAAA (5) 12.7 0.0127 E18.5 retina CCCCTTATTT (3) 9.1 0.0091 E18.5 retina CTGGGCCCAG (8) 3.6 0.0036 P0.5 retina CTGGGCCCAG (8) 7.9 0.0079 P0.5 retina GTTCTCCAAA (5) 5.9 0.0059 P0.5 retina CCCCTTATTT (3) 2 0.002 P2.5 retina CTGGGCCCAG (8) 15.8 0.0158 P2.5 retina CCCCTTATTT (3) 10.6 0.0106 P2.5 retina GTTCTCCAAA (5) 8.8 0.0088 P2.5 retina CAGCCCTGGG (12) 1.8 0.0018 P4.5 retina CTGGGCCCAG (8) 11.9 0.0119 P4.5 retina GTTCTCCAAA (5) 11.9 0.0119 P4.5 retina CCCCTTATTT (3) 2 0.002 P4.5 retina TGTGGTCTGT (3) 2 0.002 P6.5 retina CTGGGCCCAG (8) 11.7 0.0117 P6.5 retina GTTCTCCAAA (5) 8.3 0.0083 P6.5 retina CCCCTTATTT (3) 5 0.005 P6.5 retina CACACACAGA (5) 1.7 0.0017 P10.5 crx- retina CCCCTTATTT (3) 24.2 0.0242 P10.5 crx- retina GTTCTCCAAA (5) 7.4 0.0074 P10.5 crx- retina CAGCCCTGGG (12) 1.9 0.0019 P10.5 crx- retina CTGGGCCCAG (8) 1.9 0.0019 P10.5 crx- retina TGTGGTCTGT (3) 1.9 0.0019 P10.5 crx+ retina CTGGGCCCAG (8) 23.1 0.0231 P10.5 crx+ retina GTTCTCCAAA (5) 11.5 0.0115 P10.5 crx+ retina CCCCTTATTT (3) 7.7 0.0077 Adult retinal CTGGGCCCAG (8) 13 0.013 Adult retinal GTTCTCCAAA (5) 11.1 0.0111 Adult retinal CACACACAGA (5) 1.9 0.0019 Adult retinal CCCCTTATTT (3) 1.9 0.0019 ONL GTTCTCCAAA (5) 7.7 0.0077 ONL CACACACAGA (5) 3.8 0.0038