Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.274120	Gtf3c5	general transcription factor IIIC, polypeptide 5	2		70239
Gene Ontology	DNA binding | nucleus | transcription
Human Homolog	GTF3C5[general transcription factor IIIC, polypeptide 5, 63kDa]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 54 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACAAAAAAAA (31) 6.5 0.0065 P8 Cb GC GCGGCGGCGG (24) 6.5 0.0065 P8 Cb GC TAAATCAAAG (2) 4.9 0.0049 Cb medulloblastoma ACAAAAAAAA (31) 34.7 0.0347 Cb medulloblastoma GCGGCGGCGG (24) 4.6 0.0046 Cb medulloblastoma TAAATCAAAG (2) 4.6 0.0046 Cb medulloblastoma GAAGAACCGC (2) 2.3 0.0023 P8 GC+1d culture ACAAAAAAAA (31) 5.7 0.0057 P8 GC+1d culture GCGGCGGCGG (24) 4.6 0.0046 P8 GC+1d culture TAAATCAAAG (2) 1.1 0.0011 P8 GC+SHH+1d culture GCGGCGGCGG (24) 16.4 0.0164 P8 GC+SHH+1d culture ACAAAAAAAA (31) 14.1 0.0141 P8 GC+SHH+1d culture TAAATCAAAG (2) 2.3 0.0023 3T3 fibroblasts GCGGCGGCGG (24) 3.5 0.0035 E15 cortex ACAAAAAAAA (31) 4.9 0.0049 P1 cortex ACAAAAAAAA (31) 4.5 0.0045 Hypothalamus ACAAAAAAAA (31) 10.9 0.0109 Hypothalamus TAAATCAAAG (2) 9.1 0.0091 Hypothalamus GCGGCGGCGG (24) 7.2 0.0072 Hypothalamus GAAGAACCGC (2) 1.8 0.0018 E12.5 retina GCGGCGGCGG (24) 15 0.015 E12.5 retina TAAATCAAAG (2) 13.1 0.0131 E12.5 retina ACAAAAAAAA (31) 1.9 0.0019 E14.5 retina ACAAAAAAAA (31) 5.5 0.0055 E14.5 retina GCGGCGGCGG (24) 5.5 0.0055 E14.5 retina TAAATCAAAG (2) 5.5 0.0055 E16.5 retina GCGGCGGCGG (24) 14.5 0.0145 E16.5 retina TAAATCAAAG (2) 10.9 0.0109 E16.5 retina ACAAAAAAAA (31) 1.8 0.0018 E18.5 retina ACAAAAAAAA (31) 14.6 0.0146 E18.5 retina GCGGCGGCGG (24) 9.1 0.0091 E18.5 retina TAAATCAAAG (2) 7.3 0.0073 P0.5 retina GCGGCGGCGG (24) 7.9 0.0079 P0.5 retina ACAAAAAAAA (31) 5.9 0.0059 P0.5 retina TAAATCAAAG (2) 2 0.002 P2.5 retina GCGGCGGCGG (24) 7 0.007 P2.5 retina TAAATCAAAG (2) 7 0.007 P2.5 retina ACAAAAAAAA (31) 5.3 0.0053 P4.5 retina TAAATCAAAG (2) 13.9 0.0139 P4.5 retina ACAAAAAAAA (31) 5.9 0.0059 P4.5 retina GCGGCGGCGG (24) 4 0.004 P6.5 retina GCGGCGGCGG (24) 5 0.005 P6.5 retina TAAATCAAAG (2) 5 0.005 P6.5 retina ACAAAAAAAA (31) 1.7 0.0017 P6.5 retina GAAGAACCGC (2) 1.7 0.0017 P10.5 crx- retina TAAATCAAAG (2) 7.4 0.0074 P10.5 crx- retina ACAAAAAAAA (31) 1.9 0.0019 P10.5 crx- retina GCGGCGGCGG (24) 1.9 0.0019 P10.5 crx+ retina GCGGCGGCGG (24) 15.4 0.0154 P10.5 crx+ retina ACAAAAAAAA (31) 11.5 0.0115 P10.5 crx+ retina TAAATCAAAG (2) 7.7 0.0077 Adult retinal GCGGCGGCGG (24) 16.7 0.0167 ONL GCGGCGGCGG (24) 9.6 0.0096 ONL ACAAAAAAAA (31) 5.7 0.0057