Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.274432	2510010E17Rik	RIKEN cDNA 2510010E17 gene	14		76590
Mm.274432	Ppp3cb	protein phosphatase 3, catalytic subunit, beta isoform	14		19056
Gene Ontology	calmodulin binding | heart development | hydrolase activity | phosphoprotein phosphatase activity | protein amino acid dephosphorylation | protein serine/threonine phosphatase activity | protein serine/threonine phosphatase activity | protein serine/threonine phosphatase complex | T-cell differentiation
Human Homolog	PPP3CB[protein phosphatase 3 (formerly 2B), catalytic subunit, beta isoform (calcineurin A beta)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 162 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGCCGCTGCT (3) 44 0.044 P8 Cb GC AAATAAAACA (10) 17.9 0.0179 P8 Cb GC AAAATAAAAA (28) 6.5 0.0065 P8 Cb GC AGTTAAATTC (2) 1.6 0.0016 P8 Cb GC GAAATGTAAT (3) 1.6 0.0016 P8 Cb GC GGCAAAAAAA (17) 1.6 0.0016 P8 Cb GC GGGTGAGGGT (8) 1.6 0.0016 P8 Cb GC GTCTTAAAAT (3) 1.6 0.0016 P8 Cb GC TAAGTCAAAA (2) 1.6 0.0016 P8 Cb GC TTTTCATTTT (13) 1.6 0.0016 Cb medulloblastoma GGCCGCTGCT (3) 57.8 0.0578 Cb medulloblastoma AAATAAAACA (10) 39.3 0.0393 Cb medulloblastoma GGCAAAAAAA (17) 11.6 0.0116 Cb medulloblastoma AAAATAAAAA (28) 9.2 0.0092 Cb medulloblastoma GGGTGAGGGT (8) 4.6 0.0046 Cb medulloblastoma AAAATCGAAG (2) 2.3 0.0023 Cb medulloblastoma GAAATGTAAT (3) 2.3 0.0023 P8 GC+1d culture GGCCGCTGCT (3) 33.1 0.0331 P8 GC+1d culture GGGTGAGGGT (8) 14.8 0.0148 P8 GC+1d culture AAATAAAACA (10) 13.7 0.0137 P8 GC+1d culture AAAATAAAAA (28) 8 0.008 P8 GC+1d culture CTGGTGCTTT (4) 1.1 0.0011 P8 GC+1d culture TGCAAAGCTC (3) 1.1 0.0011 P8 GC+1d culture TTTTCATTTT (13) 1.1 0.0011 P8 GC+SHH+1d culture GGCCGCTGCT (3) 32.8 0.0328 P8 GC+SHH+1d culture AAATAAAACA (10) 29.3 0.0293 P8 GC+SHH+1d culture GGGTGAGGGT (8) 8.2 0.0082 P8 GC+SHH+1d culture AAAATAAAAA (28) 5.9 0.0059 P8 GC+SHH+1d culture CATAATATTT (2) 3.5 0.0035 P8 GC+SHH+1d culture AAAATCGAAG (2) 1.2 0.0012 P8 GC+SHH+1d culture AGTTAAATTC (2) 1.2 0.0012 P8 GC+SHH+1d culture CAGGAAACTC (8) 1.2 0.0012 P8 GC+SHH+1d culture GGCAAAAAAA (17) 1.2 0.0012 P8 GC+SHH+1d culture TGCAAAGCTC (3) 1.2 0.0012 P8 GC+SHH+1d culture TTTTCATTTT (13) 1.2 0.0012 3T3 fibroblasts GGGTGAGGGT (8) 3.5 0.0035 E15 cortex GGCCGCTGCT (3) 44.5 0.0445 E15 cortex AAATAAAACA (10) 4.9 0.0049 E15 cortex AAGCTCAAGA (6) 4.9 0.0049 E15 cortex GTCTTAAAAT (3) 4.9 0.0049 E15 cortex TGCAAAGCTC (3) 4.9 0.0049 P1 cortex GGCCGCTGCT (3) 36.4 0.0364 P1 cortex AAAATAAAAA (28) 9.1 0.0091 P1 cortex AAATAAAACA (10) 9.1 0.0091 P1 cortex GGGTGAGGGT (8) 9.1 0.0091 P1 cortex AAAATCGAAG (2) 4.5 0.0045 P1 cortex AAATAAAAAC (10) 4.5 0.0045 P1 cortex AGTTAAATTC (2) 4.5 0.0045 P1 cortex GAAATGTAAT (3) 4.5 0.0045 P1 cortex TTTTCATTTT (13) 4.5 0.0045 Hypothalamus AAATAAAACA (10) 48.9 0.0489 Hypothalamus GGCCGCTGCT (3) 39.8 0.0398 Hypothalamus GGGTGAGGGT (8) 9.1 0.0091 Hypothalamus AAAATAAAAA (28) 3.6 0.0036 Hypothalamus AGGGAAGCAG (3) 3.6 0.0036 Hypothalamus GGCAAAAAAA (17) 3.6 0.0036 Hypothalamus AGTTAAATTC (2) 1.8 0.0018 Hypothalamus CATAATATTT (2) 1.8 0.0018 Hypothalamus GTCTTAAAAT (3) 1.8 0.0018 Hypothalamus TGCAAAGCTC (3) 1.8 0.0018 E12.5 retina AAATAAAACA (10) 24.4 0.0244 E12.5 retina GGCCGCTGCT (3) 13.1 0.0131 E12.5 retina GGGTGAGGGT (8) 9.4 0.0094 E12.5 retina AAAATAAAAA (28) 5.6 0.0056 E12.5 retina AAATAAAAAC (10) 1.9 0.0019 E12.5 retina AAGCTCAAGA (6) 1.9 0.0019 E12.5 retina CATAATATTT (2) 1.9 0.0019 E12.5 retina TATAGGTTAC (2) 1.9 0.0019 E14.5 retina AAATAAAACA (10) 34.6 0.0346 E14.5 retina GGCCGCTGCT (3) 18.2 0.0182 E14.5 retina AAAATAAAAA (28) 14.6 0.0146 E14.5 retina AAGCTCAAGA (6) 12.8 0.0128 E14.5 retina CAGGAAACTC (8) 3.6 0.0036 E14.5 retina GGCAAAAAAA (17) 3.6 0.0036 E14.5 retina AGTTAAATTC (2) 1.8 0.0018 E14.5 retina GTCTTAAAAT (3) 1.8 0.0018 E16.5 retina AAATAAAACA (10) 29 0.029 E16.5 retina GGCCGCTGCT (3) 23.5 0.0235 E16.5 retina AAAATAAAAA (28) 10.9 0.0109 E16.5 retina CATAATATTT (2) 3.6 0.0036 E16.5 retina TATAGGTTAC (2) 3.6 0.0036 E16.5 retina CCCTGGAGTA (2) 1.8 0.0018 E16.5 retina GGGTGAGGGT (8) 1.8 0.0018 E18.5 retina AAATAAAACA (10) 52.8 0.0528 E18.5 retina GGCCGCTGCT (3) 38.2 0.0382 E18.5 retina AAAATAAAAA (28) 16.4 0.0164 E18.5 retina GGGTGAGGGT (8) 1.8 0.0018 E18.5 retina TAAGTCAAAA (2) 1.8 0.0018 P0.5 retina GGCCGCTGCT (3) 19.6 0.0196 P0.5 retina GGGTGAGGGT (8) 9.8 0.0098 P0.5 retina AAATAAAACA (10) 7.9 0.0079 P0.5 retina AAAATAAAAA (28) 5.9 0.0059 P0.5 retina TGCAAAGCTC (3) 3.9 0.0039 P0.5 retina GGCCGCTGCA (4) 2 0.002 P2.5 retina GGCCGCTGCT (3) 47.5 0.0475 P2.5 retina AAAATAAAAA (28) 19.4 0.0194 P2.5 retina AAATAAAACA (10) 15.8 0.0158 P2.5 retina GGGTGAGGGT (8) 8.8 0.0088 P2.5 retina TAAGTCAAAA (2) 7 0.007 P2.5 retina GTCTTAAAAT (3) 5.3 0.0053 P2.5 retina AAATAAAAAC (10) 1.8 0.0018 P2.5 retina AAGCTCAAGA (6) 1.8 0.0018 P2.5 retina CAGGAAACTC (8) 1.8 0.0018 P2.5 retina CTGGTGCTTT (4) 1.8 0.0018 P2.5 retina TGCAAAGCTC (3) 1.8 0.0018 P2.5 retina TTCTTAAAAT (3) 1.8 0.0018 P2.5 retina TTTTCATTTT (13) 1.8 0.0018 P4.5 retina GGCCGCTGCT (3) 69.3 0.0693 P4.5 retina AAATAAAACA (10) 25.8 0.0258 P4.5 retina AAAATAAAAA (28) 21.8 0.0218 P4.5 retina GGGTGAGGGT (8) 5.9 0.0059 P4.5 retina TAAGTCAAAA (2) 5.9 0.0059 P4.5 retina AGGGAAGCAG (3) 2 0.002 P4.5 retina AGTTAAATTC (2) 2 0.002 P4.5 retina CAGGAAACTC (8) 2 0.002 P4.5 retina GAAATGTAAT (3) 2 0.002 P4.5 retina GGCAAAAAAA (17) 2 0.002 P4.5 retina TTCTTAAAAT (3) 2 0.002 P6.5 retina GGCCGCTGCT (3) 48.4 0.0484 P6.5 retina AAATAAAACA (10) 41.7 0.0417 P6.5 retina GGGTGAGGGT (8) 20 0.02 P6.5 retina AAAATAAAAA (28) 11.7 0.0117 P6.5 retina TAAGTCAAAA (2) 3.3 0.0033 P6.5 retina CTGGTGCTTT (4) 1.7 0.0017 P6.5 retina GGCAAAAAAA (17) 1.7 0.0017 P6.5 retina GTCTTAAAAT (3) 1.7 0.0017 P10.5 crx- retina GGCCGCTGCT (3) 52 0.052 P10.5 crx- retina AAATAAAACA (10) 26 0.026 P10.5 crx- retina GGGTGAGGGT (8) 14.9 0.0149 P10.5 crx- retina AAAATAAAAA (28) 3.7 0.0037 P10.5 crx- retina CATAATATTT (2) 1.9 0.0019 P10.5 crx- retina GGCAAAAAAA (17) 1.9 0.0019 P10.5 crx- retina GGCCGCTGCA (4) 1.9 0.0019 P10.5 crx- retina TAAGTCAAAA (2) 1.9 0.0019 P10.5 crx+ retina GGCCGCTGCT (3) 103.8 0.1038 P10.5 crx+ retina AAATAAAACA (10) 21.1 0.0211 P10.5 crx+ retina GGCAAAAAAA (17) 3.8 0.0038 P10.5 crx+ retina AAAATAAAAA (28) 1.9 0.0019 P10.5 crx+ retina AAAATCGAAG (2) 1.9 0.0019 P10.5 crx+ retina AAATAAAAAC (10) 1.9 0.0019 P10.5 crx+ retina CATAATATTT (2) 1.9 0.0019 P10.5 crx+ retina CCCTGGAGTA (2) 1.9 0.0019 P10.5 crx+ retina GGCCGCTGCA (4) 1.9 0.0019 P10.5 crx+ retina GGGTGAGGGT (8) 1.9 0.0019 P10.5 crx+ retina GTCTTAAAAT (3) 1.9 0.0019 P10.5 crx+ retina TGCAAAGCTC (3) 1.9 0.0019 P10.5 crx+ retina TTCTTAAAAT (3) 1.9 0.0019 Adult retinal GGCCGCTGCT (3) 27.8 0.0278 Adult retinal AAATAAAACA (10) 3.7 0.0037 Adult retinal CAGGAAACTC (8) 3.7 0.0037 Adult retinal GGGTGAGGGT (8) 3.7 0.0037 Adult retinal AAAATAAAAA (28) 1.9 0.0019 Adult retinal AGGGAAGCAG (3) 1.9 0.0019 Adult retinal GTCTTAAAAT (3) 1.9 0.0019 Adult retinal TAAGTCAAAA (2) 1.9 0.0019 ONL AAATAAAACA (10) 32.6 0.0326 ONL AAAATAAAAA (28) 11.5 0.0115 ONL GGCCGCTGCT (3) 11.5 0.0115 ONL AAGCTCAAGA (6) 7.7 0.0077 ONL AGTTAAATTC (2) 1.9 0.0019 ONL CCCTGGAGTA (2) 1.9 0.0019 ONL GAAATGTAAT (3) 1.9 0.0019