Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.274492
2410002F23Rik
RIKEN cDNA 2410002F23 gene
7
7 B3
66976
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
Total 7 In Situ Hybridization Images
Images -- Click to Enlarge
SAGE Tags
Total 89 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CAGGTCAGTG
(
4
)
6.5
0.0065
P8 Cb GC
CCCTTCCCTT
(
9
)
4.9
0.0049
P8 Cb GC
GAAGTACGGC
4.9
0.0049
P8 Cb GC
GTTAAAAAAA (
26
)
4.9
0.0049
P8 Cb GC
GCCTTTTACT
(
2
)
3.3
0.0033
P8 Cb GC
GACCCCAAAG (
4
)
1.6
0.0016
P8 Cb GC
GTTAAAAGAA
(
6
)
1.6
0.0016
P8 Cb GC
TTCCTAGCCA
(
2
)
1.6
0.0016
Cb medulloblastoma
GTTAAAAAAA (
26
)
25.4
0.0254
Cb medulloblastoma
GACCCCAAAG (
4
)
2.3
0.0023
P8 GC+1d culture
CCCTTCCCTT
(
9
)
14.8
0.0148
P8 GC+1d culture
GTTAAAAAAA (
26
)
13.7
0.0137
P8 GC+1d culture
GCCTTTTACT
(
2
)
4.6
0.0046
P8 GC+1d culture
GAAGTACGGC
2.3
0.0023
P8 GC+1d culture
GCTATGAACT (
6
)
2.3
0.0023
P8 GC+1d culture
GCTGAGGGGC (
7
)
1.1
0.0011
P8 GC+1d culture
GTTAAAAGAA
(
6
)
1.1
0.0011
P8 GC+SHH+1d culture
CCCTTCCCTT
(
9
)
17.6
0.0176
P8 GC+SHH+1d culture
GTTAAAAAAA (
26
)
16.4
0.0164
P8 GC+SHH+1d culture
GCCTTTTACT
(
2
)
3.5
0.0035
P8 GC+SHH+1d culture
GTTAAAAGAA
(
6
)
2.3
0.0023
P8 GC+SHH+1d culture
GAAGTACGGC
1.2
0.0012
P8 GC+SHH+1d culture
GACCCCAAAG (
4
)
1.2
0.0012
P8 GC+SHH+1d culture
GCTGAGGGGC (
7
)
1.2
0.0012
P8 GC+SHH+1d culture
TTCCTAGCCA
(
2
)
1.2
0.0012
3T3 fibroblasts
CCCTTCCCTT
(
9
)
3.5
0.0035
E15 cortex
CCCTTCCCTT
(
9
)
24.7
0.0247
P1 cortex
CCCTTCCCTT
(
9
)
18.2
0.0182
P1 cortex
GTTAAAAGAA
(
6
)
13.6
0.0136
P1 cortex
GTTAAAAAAA (
26
)
4.5
0.0045
Hypothalamus
GTTAAAAAAA (
26
)
9.1
0.0091
Hypothalamus
CCCTTCCCTT
(
9
)
5.4
0.0054
Hypothalamus
GTTAAAAGAA
(
6
)
5.4
0.0054
Hypothalamus
ACAGTGTTGG
(
4
)
3.6
0.0036
Hypothalamus
ATGCCATCTT
(
4
)
1.8
0.0018
Hypothalamus
GCCTTTTACT
(
2
)
1.8
0.0018
Hypothalamus
GCTATGAACT (
6
)
1.8
0.0018
E12.5 retina
CCCTTCCCTT
(
9
)
16.9
0.0169
E12.5 retina
GAAGTACGGC
9.4
0.0094
E12.5 retina
GTTAAAAAAA (
26
)
3.8
0.0038
E12.5 retina
GCCTTTTACT
(
2
)
1.9
0.0019
E14.5 retina
GTTAAAAAAA (
26
)
20
0.02
E14.5 retina
CCCTTCCCTT
(
9
)
10.9
0.0109
E14.5 retina
GAAGTACGGC
1.8
0.0018
E14.5 retina
GCCTTTTACT
(
2
)
1.8
0.0018
E16.5 retina
CCCTTCCCTT
(
9
)
41.7
0.0417
E16.5 retina
GTTAAAAAAA (
26
)
16.3
0.0163
E16.5 retina
ACAGTGTTGG
(
4
)
3.6
0.0036
E16.5 retina
GCCTTTTACT
(
2
)
3.6
0.0036
E16.5 retina
GTTAAAAGAA
(
6
)
3.6
0.0036
E18.5 retina
GTTAAAAAAA (
26
)
27.3
0.0273
E18.5 retina
CCCTTCCCTT
(
9
)
9.1
0.0091
E18.5 retina
GCCTTTTACT
(
2
)
3.6
0.0036
E18.5 retina
GTTAAAAGAA
(
6
)
3.6
0.0036
E18.5 retina
ACAGTGTTGG
(
4
)
1.8
0.0018
E18.5 retina
GAAGTACGGC
1.8
0.0018
P0.5 retina
CCCTTCCCTT
(
9
)
37.3
0.0373
P0.5 retina
GTTAAAAGAA
(
6
)
7.9
0.0079
P0.5 retina
GTTAAAAAAA (
26
)
3.9
0.0039
P0.5 retina
GAAGTACGGC
2
0.002
P0.5 retina
GACCCCAAAG (
4
)
2
0.002
P2.5 retina
CCCTTCCCTT
(
9
)
17.6
0.0176
P2.5 retina
GAAGTACGGC
7
0.007
P2.5 retina
GTTAAAAAAA (
26
)
7
0.007
P2.5 retina
GCCTTTTACT
(
2
)
3.5
0.0035
P2.5 retina
GACCCCAAAG (
4
)
1.8
0.0018
P2.5 retina
GTTAAAAGAA
(
6
)
1.8
0.0018
P2.5 retina
TTCCTAGCCA
(
2
)
1.8
0.0018
P4.5 retina
GTTAAAAAAA (
26
)
11.9
0.0119
P4.5 retina
CCCTTCCCTT
(
9
)
5.9
0.0059
P4.5 retina
GTTAAAAGAA
(
6
)
5.9
0.0059
P4.5 retina
GCCTTTTACT
(
2
)
2
0.002
P6.5 retina
CCCTTCCCTT
(
9
)
15
0.015
P6.5 retina
GTTAAAAAAA (
26
)
15
0.015
P10.5 crx- retina
GTTAAAAAAA (
26
)
5.6
0.0056
P10.5 crx- retina
CCCTTCCCTT
(
9
)
3.7
0.0037
P10.5 crx- retina
GTTAAAAGAA
(
6
)
3.7
0.0037
P10.5 crx- retina
ATGCCATCTT
(
4
)
1.9
0.0019
P10.5 crx+ retina
GTTAAAAAAA (
26
)
15.4
0.0154
P10.5 crx+ retina
GAAGTACGGC
13.5
0.0135
P10.5 crx+ retina
CCCTTCCCTT
(
9
)
3.8
0.0038
P10.5 crx+ retina
GCCTTTTACT
(
2
)
3.8
0.0038
P10.5 crx+ retina
GTTAAAAGAA
(
6
)
3.8
0.0038
P10.5 crx+ retina
ATGCCATCTT
(
4
)
1.9
0.0019
P10.5 crx+ retina
GCTGAGGGGC (
7
)
1.9
0.0019
Adult retinal
CCCTTCCCTT
(
9
)
5.6
0.0056
ONL
GCCTTTTACT
(
2
)
3.8
0.0038
ONL
GTTAAAAAAA (
26
)
3.8
0.0038
ONL
GTTAAAAGAA
(
6
)
1.9
0.0019
