Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.274926	A430106F12Rik	RIKEN cDNA A430106F12 gene	13		77934
Mm.274926	Emb	embigin	13		13723
Gene Ontology	integral to membrane
Human Homolog	MGC71745[similar to embigin]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 159 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAAACTTGTC (2) 9.8 0.0098 P8 Cb GC GGAAAAAAAA (69) 8.2 0.0082 P8 Cb GC AACAGGCTCA (3) 3.3 0.0033 P8 Cb GC TCCCTGTGGG (6) 3.3 0.0033 P8 Cb GC TCCTGTGGGT (5) 3.3 0.0033 P8 Cb GC TGGAGCTGGG (6) 3.3 0.0033 P8 Cb GC GAAGGCATCT (8) 1.6 0.0016 P8 Cb GC GGAAAAAAAG (8) 1.6 0.0016 P8 Cb GC GGAAACAAAA (11) 1.6 0.0016 P8 Cb GC GGGAAAAAAA (36) 1.6 0.0016 P8 Cb GC TGCGGAAAAA (5) 1.6 0.0016 P8 Cb GC TGTTTGTGTT (11) 1.6 0.0016 Cb medulloblastoma GGGAAAAAAA (36) 92.5 0.0925 Cb medulloblastoma GGAAAAAAAA (69) 41.6 0.0416 Cb medulloblastoma TCCTGTGGGT (5) 11.6 0.0116 Cb medulloblastoma GAAACTTGTC (2) 9.2 0.0092 Cb medulloblastoma AACAGGCTCA (3) 2.3 0.0023 Cb medulloblastoma GGAAACAAAA (11) 2.3 0.0023 Cb medulloblastoma GGTAATGAAA (2) 2.3 0.0023 Cb medulloblastoma TGGAGCTGGG (6) 2.3 0.0023 Cb medulloblastoma TTCTACTTAA (5) 2.3 0.0023 P8 GC+1d culture GGAAAAAAAA (69) 5.7 0.0057 P8 GC+1d culture TCCTGTGGGT (5) 3.4 0.0034 P8 GC+1d culture AACAAGCTCA (2) 2.3 0.0023 P8 GC+1d culture TCCCTGTGGG (6) 2.3 0.0023 P8 GC+1d culture TTTTTTTTTG (8) 2.3 0.0023 P8 GC+1d culture AGCCACCACA (4) 1.1 0.0011 P8 GC+1d culture CAGGTAGCCG (2) 1.1 0.0011 P8 GC+1d culture GAAACTTGTC (2) 1.1 0.0011 P8 GC+1d culture GGGAAAAAAA (36) 1.1 0.0011 P8 GC+1d culture GGTAATGAAA (2) 1.1 0.0011 P8 GC+1d culture TGGAGCTGGG (6) 1.1 0.0011 P8 GC+1d culture TTCTACTTAA (5) 1.1 0.0011 P8 GC+SHH+1d culture GGAAAAAAAA (69) 7 0.007 P8 GC+SHH+1d culture TCCTGTGGGT (5) 7 0.007 P8 GC+SHH+1d culture AACAGGCTCA (3) 2.3 0.0023 P8 GC+SHH+1d culture GGTAATGAAA (2) 2.3 0.0023 P8 GC+SHH+1d culture TTCTACTTAA (5) 2.3 0.0023 P8 GC+SHH+1d culture AACAAGCTCA (2) 1.2 0.0012 P8 GC+SHH+1d culture GAAACTTGTC (2) 1.2 0.0012 P8 GC+SHH+1d culture GGGAAAAAAA (36) 1.2 0.0012 P8 GC+SHH+1d culture GGTACTGAAA (5) 1.2 0.0012 P8 GC+SHH+1d culture TCCCTGTGGG (6) 1.2 0.0012 P8 GC+SHH+1d culture TGCGGAAAAA (5) 1.2 0.0012 P8 GC+SHH+1d culture TTTTTTTTTG (8) 1.2 0.0012 3T3 fibroblasts TCCCTGTGGG (6) 17.5 0.0175 3T3 fibroblasts AGCCACCACA (4) 3.5 0.0035 E15 cortex GGAAAAAAAA (69) 9.9 0.0099 E15 cortex TGCGGAAAAA (5) 4.9 0.0049 P1 cortex GGAAAAAAAA (69) 4.5 0.0045 P1 cortex GGAAACAAAA (11) 4.5 0.0045 P1 cortex GGGAAAAAAA (36) 4.5 0.0045 P1 cortex TTTTTTTTTG (8) 4.5 0.0045 Hypothalamus GGGAAAAAAA (36) 41.7 0.0417 Hypothalamus GGAAAAAAAA (69) 14.5 0.0145 Hypothalamus AGCCACCACA (4) 3.6 0.0036 Hypothalamus AACAAGCTCA (2) 1.8 0.0018 Hypothalamus GAAACTTGTC (2) 1.8 0.0018 Hypothalamus GGTAATGAAA (2) 1.8 0.0018 Hypothalamus GGTACTGAAA (5) 1.8 0.0018 Hypothalamus TCCTGTGGGT (5) 1.8 0.0018 Hypothalamus TTTTTTTTTG (8) 1.8 0.0018 E12.5 retina GAAACTTGTC (2) 9.4 0.0094 E12.5 retina GGAAAAAAAA (69) 1.9 0.0019 E12.5 retina GGTAATGAAA (2) 1.9 0.0019 E12.5 retina TCCCTGTGGG (6) 1.9 0.0019 E12.5 retina TCCTGTGGGT (5) 1.9 0.0019 E12.5 retina TGGAGCTGGG (6) 1.9 0.0019 E14.5 retina GGAAAAAAAA (69) 10.9 0.0109 E14.5 retina TCCTGTGGGT (5) 5.5 0.0055 E14.5 retina AACAAGCTCA (2) 3.6 0.0036 E14.5 retina GAAACTTGTC (2) 3.6 0.0036 E14.5 retina GGTAATGAAA (2) 3.6 0.0036 E14.5 retina GGGAAAAAAA (36) 1.8 0.0018 E14.5 retina GGTACTGAAA (5) 1.8 0.0018 E14.5 retina TGCGGAAAAA (5) 1.8 0.0018 E16.5 retina GAAACTTGTC (2) 5.4 0.0054 E16.5 retina TCCTGTGGGT (5) 5.4 0.0054 E16.5 retina GGGAAAAAAA (36) 3.6 0.0036 E16.5 retina AGCCACCACA (4) 1.8 0.0018 E16.5 retina GGAAAAAAAA (69) 1.8 0.0018 E16.5 retina GGAAACAAAA (11) 1.8 0.0018 E16.5 retina GGTAATGAAA (2) 1.8 0.0018 E16.5 retina TTCTACTTAA (5) 1.8 0.0018 E16.5 retina TTTTTTTTTG (8) 1.8 0.0018 E18.5 retina GGAAAAAAAA (69) 16.4 0.0164 E18.5 retina GAAACTTGTC (2) 5.5 0.0055 E18.5 retina GGAAACAAAA (11) 3.6 0.0036 E18.5 retina GGTAATGAAA (2) 3.6 0.0036 E18.5 retina TCCCTGTGGG (6) 3.6 0.0036 E18.5 retina TCCTGTGGGT (5) 3.6 0.0036 E18.5 retina TGCGGAAAAA (5) 3.6 0.0036 E18.5 retina GGGAAAAAAA (36) 1.8 0.0018 E18.5 retina TGGAGCTGGG (6) 1.8 0.0018 E18.5 retina TTCTACTTAA (5) 1.8 0.0018 P0.5 retina GGAAAAAAAA (69) 13.7 0.0137 P0.5 retina GAAACTTGTC (2) 5.9 0.0059 P0.5 retina AACAAGCTCA (2) 3.9 0.0039 P0.5 retina GGGAAAAAAA (36) 3.9 0.0039 P0.5 retina TCCCTGTGGG (6) 3.9 0.0039 P0.5 retina AGCCACCACA (4) 2 0.002 P0.5 retina TCCTGTGGGT (5) 2 0.002 P0.5 retina TGTTTGTGTT (11) 2 0.002 P2.5 retina GGAAAAAAAA (69) 7 0.007 P2.5 retina GGGAAAAAAA (36) 7 0.007 P2.5 retina GGAAAAAAAG (8) 5.3 0.0053 P2.5 retina TCCTGTGGGT (5) 5.3 0.0053 P2.5 retina GGTAATGAAA (2) 3.5 0.0035 P2.5 retina TTTTTTTTTG (8) 3.5 0.0035 P2.5 retina AGCCACCACA (4) 1.8 0.0018 P2.5 retina GAAACTTGTC (2) 1.8 0.0018 P2.5 retina GGTACTGAAA (5) 1.8 0.0018 P2.5 retina TCCCTGTGGG (6) 1.8 0.0018 P2.5 retina TTCTACTTAA (5) 1.8 0.0018 P4.5 retina GGAAAAAAAA (69) 13.9 0.0139 P4.5 retina GGGAAAAAAA (36) 9.9 0.0099 P4.5 retina TCCTGTGGGT (5) 9.9 0.0099 P4.5 retina TTTTTTTTTG (8) 9.9 0.0099 P4.5 retina GGTAATGAAA (2) 4 0.004 P4.5 retina GAAACTTGTC (2) 2 0.002 P4.5 retina TCCCTGTGGG (6) 2 0.002 P6.5 retina GGGAAAAAAA (36) 20 0.02 P6.5 retina GGAAAAAAAA (69) 13.3 0.0133 P6.5 retina TTTTTTTTTG (8) 3.3 0.0033 P6.5 retina CAGGTAGCCG (2) 1.7 0.0017 P6.5 retina GGTAATGAAA (2) 1.7 0.0017 P6.5 retina TCCCTGTGGG (6) 1.7 0.0017 P6.5 retina TCCTGTGGGT (5) 1.7 0.0017 P10.5 crx- retina GGGAAAAAAA (36) 11.1 0.0111 P10.5 crx- retina GGAAAAAAAA (69) 3.7 0.0037 P10.5 crx- retina TCCCTGTGGG (6) 3.7 0.0037 P10.5 crx- retina TTTTTTTTTG (8) 3.7 0.0037 P10.5 crx- retina AACAGGCTCA (3) 1.9 0.0019 P10.5 crx- retina CAGGTAGCCG (2) 1.9 0.0019 P10.5 crx- retina GGTAATGAAA (2) 1.9 0.0019 P10.5 crx+ retina GGGAAAAAAA (36) 23.1 0.0231 P10.5 crx+ retina GGAAAAAAAA (69) 15.4 0.0154 P10.5 crx+ retina GAAACTTGTC (2) 3.8 0.0038 P10.5 crx+ retina TCCTGTGGGT (5) 1.9 0.0019 P10.5 crx+ retina TTTTTTTTTG (8) 1.9 0.0019 Adult retinal GGGAAAAAAA (36) 35.2 0.0352 Adult retinal GGAAAAAAAA (69) 5.6 0.0056 Adult retinal TCCCTGTGGG (6) 3.7 0.0037 Adult retinal AACAAGCTCA (2) 1.9 0.0019 Adult retinal GAAGGCATCT (8) 1.9 0.0019 Adult retinal GGTACTGAAA (5) 1.9 0.0019 Adult retinal TCCTGTGGGT (5) 1.9 0.0019 Adult retinal TTCTACTTAA (5) 1.9 0.0019 ONL GGGAAAAAAA (36) 30.6 0.0306 ONL GGAAAAAAAA (69) 17.2 0.0172 ONL TCCTGTGGGT (5) 5.7 0.0057 ONL AACAGGCTCA (3) 1.9 0.0019 ONL AGCCACCACA (4) 1.9 0.0019 ONL CAGGTAGCCG (2) 1.9 0.0019 ONL GAAACTTGTC (2) 1.9 0.0019 ONL GAAGGCATCT (8) 1.9 0.0019 ONL GGTAATGAAA (2) 1.9 0.0019 ONL TGTTTGTGTT (11) 1.9 0.0019 ONL TTTTTTTTTG (8) 1.9 0.0019