Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.275039
Xpo5
exportin 5
17
72322
Gene Ontology
protein transporter activity
|
protein-nucleus export
|
tRNA binding
Human Homolog
XPO5[exportin 5]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 102 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TCAAAAAAAA (
60
)
17.9
0.0179
P8 Cb GC
TCAGTAAAAA
(
4
)
6.5
0.0065
P8 Cb GC
CCTTTAATCT
(
38
)
4.9
0.0049
P8 Cb GC
GCTGCTGTGT (
6
)
4.9
0.0049
P8 Cb GC
AGAAACTCAA
(
4
)
3.3
0.0033
P8 Cb GC
AGAAATTCAA
1.6
0.0016
P8 Cb GC
GAAGCTCTGG
(
4
)
1.6
0.0016
Cb medulloblastoma
TCAAAAAAAA (
60
)
99.4
0.0994
Cb medulloblastoma
GCTGCTGTGT (
6
)
9.2
0.0092
Cb medulloblastoma
TCAGTAAAAA
(
4
)
6.9
0.0069
Cb medulloblastoma
GCTTGCTGTG
(
7
)
2.3
0.0023
P8 GC+1d culture
TCAAAAAAAA (
60
)
17.1
0.0171
P8 GC+1d culture
GCTGCTGTGT (
6
)
8
0.008
P8 GC+1d culture
TCAGTAAAAA
(
4
)
2.3
0.0023
P8 GC+1d culture
AAGCAGAGGA (
5
)
1.1
0.0011
P8 GC+1d culture
AGAAACTCAA
(
4
)
1.1
0.0011
P8 GC+1d culture
CCTTTAATCT
(
38
)
1.1
0.0011
P8 GC+1d culture
GAAGCTCTGG
(
4
)
1.1
0.0011
P8 GC+SHH+1d culture
TCAAAAAAAA (
60
)
51.5
0.0515
P8 GC+SHH+1d culture
TCAGTAAAAA
(
4
)
7
0.007
P8 GC+SHH+1d culture
CCTTTAATCT
(
38
)
3.5
0.0035
P8 GC+SHH+1d culture
GCTGCTGTGT (
6
)
3.5
0.0035
P8 GC+SHH+1d culture
AGAAACTCAA
(
4
)
2.3
0.0023
P8 GC+SHH+1d culture
GCTTCCCTGG
(
6
)
1.2
0.0012
3T3 fibroblasts
CCTTTAATCT
(
38
)
10.5
0.0105
3T3 fibroblasts
TCAAAAAAAA (
60
)
7
0.007
3T3 fibroblasts
AGAAACTCAA
(
4
)
3.5
0.0035
3T3 fibroblasts
GAGCCTGATC (
2
)
3.5
0.0035
3T3 fibroblasts
GCTTCCCTGG
(
6
)
3.5
0.0035
3T3 fibroblasts
GCTTGCTGTG
(
7
)
3.5
0.0035
E15 cortex
TCAAAAAAAA (
60
)
14.8
0.0148
E15 cortex
GCTGCTGTGT (
6
)
4.9
0.0049
P1 cortex
TCAAAAAAAA (
60
)
22.7
0.0227
P1 cortex
CCTTTAATCT
(
38
)
4.5
0.0045
P1 cortex
GAAGCTCTGG
(
4
)
4.5
0.0045
P1 cortex
TCAGTAAAAA
(
4
)
4.5
0.0045
Hypothalamus
TCAAAAAAAA (
60
)
39.8
0.0398
Hypothalamus
AGAAATTCAA
1.8
0.0018
Hypothalamus
CCTTTAATCT
(
38
)
1.8
0.0018
Hypothalamus
GCTGCTGTGT (
6
)
1.8
0.0018
E12.5 retina
TCAAAAAAAA (
60
)
18.8
0.0188
E12.5 retina
GCTGCTGTGT (
6
)
11.3
0.0113
E12.5 retina
TCAGTAAAAA
(
4
)
3.8
0.0038
E12.5 retina
AGAAACTCAA
(
4
)
1.9
0.0019
E12.5 retina
CCTTTAATCT
(
38
)
1.9
0.0019
E14.5 retina
TCAAAAAAAA (
60
)
41.9
0.0419
E14.5 retina
CCTTTAATCT
(
38
)
12.8
0.0128
E14.5 retina
TCAGTAAAAA
(
4
)
10.9
0.0109
E14.5 retina
GCTGCTGTGT (
6
)
3.6
0.0036
E14.5 retina
GAGCCTGATC (
2
)
1.8
0.0018
E14.5 retina
GTGGCTTGAA (
2
)
1.8
0.0018
E16.5 retina
TCAAAAAAAA (
60
)
18.1
0.0181
E16.5 retina
GCTGCTGTGT (
6
)
7.2
0.0072
E16.5 retina
TCAGTAAAAA
(
4
)
7.2
0.0072
E18.5 retina
TCAAAAAAAA (
60
)
49.1
0.0491
E18.5 retina
GCTGCTGTGT (
6
)
7.3
0.0073
E18.5 retina
TCAGTAAAAA
(
4
)
5.5
0.0055
E18.5 retina
GTGGCTTGAA (
2
)
1.8
0.0018
P0.5 retina
TCAAAAAAAA (
60
)
31.4
0.0314
P0.5 retina
AGAAACTCAA
(
4
)
3.9
0.0039
P0.5 retina
GCTGCTGTGT (
6
)
3.9
0.0039
P0.5 retina
AAGCAGAGGA (
5
)
2
0.002
P0.5 retina
CCTTTAATCT
(
38
)
2
0.002
P2.5 retina
TCAAAAAAAA (
60
)
35.2
0.0352
P2.5 retina
GCTGCTGTGT (
6
)
10.6
0.0106
P2.5 retina
TCAGTAAAAA
(
4
)
5.3
0.0053
P2.5 retina
CCTTTAATCT
(
38
)
3.5
0.0035
P2.5 retina
AAGCAGAGGA (
5
)
1.8
0.0018
P2.5 retina
AGAAACTCAA
(
4
)
1.8
0.0018
P4.5 retina
TCAAAAAAAA (
60
)
37.6
0.0376
P4.5 retina
GCTGCTGTGT (
6
)
7.9
0.0079
P4.5 retina
TCAGTAAAAA
(
4
)
7.9
0.0079
P4.5 retina
CCTTTAATCT
(
38
)
4
0.004
P6.5 retina
TCAAAAAAAA (
60
)
31.7
0.0317
P6.5 retina
CCTTTAATCT
(
38
)
11.7
0.0117
P6.5 retina
TCAGTAAAAA
(
4
)
5
0.005
P6.5 retina
AGAAACTCAA
(
4
)
3.3
0.0033
P6.5 retina
GCTGCTGTGT (
6
)
1.7
0.0017
P6.5 retina
GCTTGCTGTG
(
7
)
1.7
0.0017
P10.5 crx- retina
TCAAAAAAAA (
60
)
14.9
0.0149
P10.5 crx- retina
GCTGCTGTGT (
6
)
5.6
0.0056
P10.5 crx- retina
TCAGTAAAAA
(
4
)
3.7
0.0037
P10.5 crx- retina
GAGCCTGATC (
2
)
1.9
0.0019
P10.5 crx+ retina
TCAAAAAAAA (
60
)
17.3
0.0173
P10.5 crx+ retina
GCTGCTGTGT (
6
)
9.6
0.0096
P10.5 crx+ retina
AAGCAGAGGA (
5
)
1.9
0.0019
P10.5 crx+ retina
AGAAACTCAA
(
4
)
1.9
0.0019
P10.5 crx+ retina
GCTTCCCTGG
(
6
)
1.9
0.0019
P10.5 crx+ retina
TCAGTAAAAA
(
4
)
1.9
0.0019
Adult retinal
TCAAAAAAAA (
60
)
20.4
0.0204
Adult retinal
CCTTTAATCT
(
38
)
7.4
0.0074
Adult retinal
GCTGCTGTGT (
6
)
7.4
0.0074
Adult retinal
TCAGTAAAAA
(
4
)
7.4
0.0074
Adult retinal
AAGCAGAGGA (
5
)
1.9
0.0019
Adult retinal
AGAAACTCAA
(
4
)
1.9
0.0019
Adult retinal
AGAAATTCAA
1.9
0.0019
ONL
TCAAAAAAAA (
60
)
15.3
0.0153
ONL
CCTTTAATCT
(
38
)
11.5
0.0115
ONL
TCAGTAAAAA
(
4
)
7.7
0.0077
ONL
AAGCAGAGGA (
5
)
3.8
0.0038
ONL
AGAAACTCAA
(
4
)
1.9
0.0019
ONL
GTGGCTTGAA (
2
)
1.9
0.0019
